PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG036880.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 346aa    MW: 36850.7 Da    PI: 7.88
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG036880.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.81.8e-19264298135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       Cs+Cg+ kTp+WR gp+g+ktLCnaCG+++++ +l
  TRIDC6AG036880.2 264 CSHCGVQKTPQWRAGPEGSKTLCNACGVRFKSGRL 298
                       *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MSALRSSLRP CEAAEEVAAA VVAGPAAWGA GLLGDGFSVE ELLDLEELCE VDKDGGFLCE  60
TAPAAEEEEK CSDSHGSSAV SYELMPLIPP EMDLPAHDAE ELEWVSRIMD DSQAELPPPA  120
QLPAPAAWPP QHRRPQESAV PAVDPMRTPT ICALSTEALV PVRSKKRSKR SRGTTVWSLS  180
GASISDSASS SATSSSCSSS ASLSSFFLMD SPTFNLLDEP PRTKSKNKKS KHKLKKRGRK  240
PKSHLPPQLS GGAASPPAQG DRRCSHCGVQ KTPQWRAGPE GSKTLCNACG VRFKSGRLLP  300
EYRPACSPTF VGNLHSNSHR KVLEMRRKKD PVPVAIEAAA APAVAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.21e-38GATA family protein