PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG035510.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 694aa MW: 75185.6 Da PI: 7.7226

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG035510.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.7	1.1e-23	123	224	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f k+lt+sd+++ g +++p+ +ae++ ++ + t++ +d +g W++++iyr++++r++lt+GW+ Fv++++L +gD++vF + TRIDC6AG035510.2 123 FAKTLTQSDANNGGGFSVPRYCAETIfprldyaADPPVQ--TVIAKDVHGTAWKFRHIYRGTPRRHLLTTGWSAFVNQKKLVAGDSIVFL--R 211 89***************************96555555..8********************************************..3 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 +++ l+v+++r+ TRIDC6AG035510.2 212 GDGGDLHVGIRRA 224 488999***97 PP
2	Auxin_resp	110.2	2.1e-36	268	351	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a ++++FevvY Prast+eF+v+++ v++a++v++++GmRfkmafet+dss++++ +Gtv+gv+ ++p+rWp+S+Wr+L+ TRIDC6AG035510.2 268 AARLAGSGQPFEVVYFPRASTPEFCVRAAAVRAAMRVQWCPGMRFKMAFETQDSSRISWfMGTVAGVQVAHPTRWPQSPWRLLQ 351 6778899***************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 694 aa Download sequence
MITFADLTEP VPGAERRVDR QLWLACAGGM CTVPPVGCNV YYFPQGHTEH ALGLDAGADL 60 SAARVPALVP CRVAAVRYVA DTDTDEVFAR IRLAPLGATD ADGDVQDDAA AVADEEQEKP 120 ASFAKTLTQS DANNGGGFSV PRYCAETIFP RLDYAADPPV QTVIAKDVHG TAWKFRHIYR 180 GTPRRHLLTT GWSAFVNQKK LVAGDSIVFL RGDGGDLHVG IRRAKRGFCG AEEGSLSLTG 240 WGRYSGPMRG NASPCTRGKV RAEDVVEAAR LAGSGQPFEV VYFPRASTPE FCVRAAAVRA 300 AMRVQWCPGM RFKMAFETQD SSRISWFMGT VAGVQVAHPT RWPQSPWRLL QVTWDEPDLL 360 QNVKRVSPWL VEIVSSMPAM HLASFSPPRK KSRMPAYPEF PFEGQLLNPS FLPNPMVHGH 420 QHHYHQTDSY HPSFSPFPDC SAPSGIQGAR HSQFGPFLSD LHLTHLQSRL MYPGLRCHDH 480 VSPATIPFPP RISTDLTIGS SPARNGVSTT LPASAKRPND AKPPGLVLFG QTILTAQQMS 540 RGDSAGVVNS PAAAGYSTRN WNTDKAGNAS QGSGSTVVQN SGSTDNTSSE RPRLFGDNSH 600 GSELGLKPGQ CKVFVESDTL GRNLDCSAMG SFEELYGRLS ETFCIEGAEL RSRVLYRGAD 660 GEVKHAGDEP FSEFIKSARR LTIVTDAGSN NTGS

Sequence ? help Back to Top

Protein Sequence Length: 694 aa Download sequence

MITFADLTEP VPGAERRVDR QLWLACAGGM CTVPPVGCNV YYFPQGHTEH ALGLDAGADL  60
SAARVPALVP CRVAAVRYVA DTDTDEVFAR IRLAPLGATD ADGDVQDDAA AVADEEQEKP  120
ASFAKTLTQS DANNGGGFSV PRYCAETIFP RLDYAADPPV QTVIAKDVHG TAWKFRHIYR  180
GTPRRHLLTT GWSAFVNQKK LVAGDSIVFL RGDGGDLHVG IRRAKRGFCG AEEGSLSLTG  240
WGRYSGPMRG NASPCTRGKV RAEDVVEAAR LAGSGQPFEV VYFPRASTPE FCVRAAAVRA  300
AMRVQWCPGM RFKMAFETQD SSRISWFMGT VAGVQVAHPT RWPQSPWRLL QVTWDEPDLL  360
QNVKRVSPWL VEIVSSMPAM HLASFSPPRK KSRMPAYPEF PFEGQLLNPS FLPNPMVHGH  420
QHHYHQTDSY HPSFSPFPDC SAPSGIQGAR HSQFGPFLSD LHLTHLQSRL MYPGLRCHDH  480
VSPATIPFPP RISTDLTIGS SPARNGVSTT LPASAKRPND AKPPGLVLFG QTILTAQQMS  540
RGDSAGVVNS PAAAGYSTRN WNTDKAGNAS QGSGSTVVQN SGSTDNTSSE RPRLFGDNSH  600
GSELGLKPGQ CKVFVESDTL GRNLDCSAMG SFEELYGRLS ETFCIEGAEL RSRVLYRGAD  660
GEVKHAGDEP FSEFIKSARR LTIVTDAGSN NTGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG035510.2