PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG034450.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 157aa    MW: 17824 Da    PI: 9.1496
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG034450.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2538.6e-1786137155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s+y+GV+++++ grW A+I  +     +k  +lg+f t+eeAa+a++ a+ k++g
  TRIDC6AG034450.3  86 SKYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 137
                       89****************988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MTASPSPPGM ILYCPPQSVY LGGYDKEDKA ARAYDLAALK YWGTTTTTNF PINTYEKEVD  60
EMKHMTRQEY IAYLRRNSSG FSRGASKYRG VTRHHQHGRW QARIGRVAGN KDLYLGTFST  120
EEEAAEAYDI AAIKFRGLNA VTNFDMSRYD VKTILES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20840.13e-79AP2 family protein