PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG034450.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 607aa MW: 65305.8 Da PI: 6.6816

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG034450.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	44.9	2.9e-14	228	287	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +++Aa+a++ a++k++g TRIDC6AG034450.2 228 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEDKAARAYDLAALKYWG 287 57*****************666664477446******99***********98 PP
2	AP2	50	7.5e-16	330	381	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g TRIDC6AG034450.2 330 SKYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 381 89**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 607 aa Download sequence
VPGHHQPSYG ITEAFNRGAH EIHDWNMRGD LDYNGGASEL SMLVGSSAVG GKRAAMEAET 60 EPKLEDFLVG NSFVSEQDQA GGFLFSGVPM ATSTNSNSRS NTMELSMIKS WLRDNQVPQA 120 PHPQSQTGAP AQQPQPHEEM GTDASSFDPL GRNGALVVAG SSQSLALSMS TGSGSHLPMA 180 VLGGSPSGGV SESTSSENKR ASGAMDSPGG AVEAVARKSI DTFGQRTSIY RGVTRHRWTG 240 RYEAHLWDNS CRREGQSRKG RQVYLGGYDK EDKAARAYDL AALKYWGTTT TTNFPINTYE 300 KEVDEMKHMT RQEYIAYLRR NSSGFSRGAS KYRGVTRHHQ HGRWQARIGR VAGNKDLYLG 360 TFSTEEEAAE AYDIAAIKFR GLNAVTNFDM SRYDVKTILE SSTLPVGGAA RRPKEVADHP 420 EAGATIWRAG MDGGVISQLT DVGMGTYASY HHGWPTIAFQ QPSPLSVHYP YVAQPSRGWC 480 KPEQDASVAT QSLQDLQQLH LGTAAHNYFQ ASSSSTVYNG GGYQQGTSGN AFLMPASTVV 540 DEQGHSSTAT NQGSTCSYGD EDGKLNLGYD AMAMASTGAD PYAAAPTVSI ARANGYSNNW 600 SSPFNGM

Sequence ? help Back to Top

Protein Sequence Length: 607 aa Download sequence

VPGHHQPSYG ITEAFNRGAH EIHDWNMRGD LDYNGGASEL SMLVGSSAVG GKRAAMEAET  60
EPKLEDFLVG NSFVSEQDQA GGFLFSGVPM ATSTNSNSRS NTMELSMIKS WLRDNQVPQA  120
PHPQSQTGAP AQQPQPHEEM GTDASSFDPL GRNGALVVAG SSQSLALSMS TGSGSHLPMA  180
VLGGSPSGGV SESTSSENKR ASGAMDSPGG AVEAVARKSI DTFGQRTSIY RGVTRHRWTG  240
RYEAHLWDNS CRREGQSRKG RQVYLGGYDK EDKAARAYDL AALKYWGTTT TTNFPINTYE  300
KEVDEMKHMT RQEYIAYLRR NSSGFSRGAS KYRGVTRHHQ HGRWQARIGR VAGNKDLYLG  360
TFSTEEEAAE AYDIAAIKFR GLNAVTNFDM SRYDVKTILE SSTLPVGGAA RRPKEVADHP  420
EAGATIWRAG MDGGVISQLT DVGMGTYASY HHGWPTIAFQ QPSPLSVHYP YVAQPSRGWC  480
KPEQDASVAT QSLQDLQQLH LGTAAHNYFQ ASSSSTVYNG GGYQQGTSGN AFLMPASTVV  540
DEQGHSSTAT NQGSTCSYGD EDGKLNLGYD AMAMASTGAD PYAAAPTVSI ARANGYSNNW  600
SSPFNGM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	1e-119	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG034450.2