PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG034450.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 656aa MW: 70252 Da PI: 6.2328

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG034450.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	33.4	1.2e-10	280	336	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +++Aa+a++ a++k++g TRIDC6AG034450.1 280 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEDKAARAYDLAALKYWG 336 57*****************5444.2455535555.7799999***********98 PP
2	AP2	49.8	8.3e-16	379	430	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g TRIDC6AG034450.1 379 SKYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 430 89**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 656 aa Download sequence
MASGNDWLGF SLSGQENPQP HQDSSPPADI DIVGASGFYG LPTQPAPDAQ LGVPGHHQPS 60 YGITEAFNRG AHEIHDWNMR GDLDYNGGAS ELSMLVGSSA VGGKRAAMEA ETEPKLEDFL 120 VGNSFVSEQD QAGGFLFSGV PMATSTNSNS RSNTMELSMI KSWLRDNQVP QAPHPQSQTG 180 APAQQPQPHE EMGTDASSFD PLGRNGALVV AGSSQSLALS MSTGSGSHLP MAVLGGSPSG 240 GVSESTSSEN KRASGAMDSP GGAVEAVARK SIDTFGQRTS IYRGVTRHRW TGRYEAHLWD 300 NSCRREGQSR KGRQGGYDKE DKAARAYDLA ALKYWGTTTT TNFPINTYEK EVDEMKHMTR 360 QEYIAYLRRN SSGFSRGASK YRGVTRHHQH GRWQARIGRV AGNKDLYLGT FSTEEEAAEA 420 YDIAAIKFRG LNAVTNFDMS RYDVKTILES STLPVGGAAR RPKEVADHPE AGATIWRAGM 480 DGGVISQLTD VGMGTYASYH HGWPTIAFQQ PSPLSVHYPY VAQPSRGWCK PEQDASVATQ 540 SLQDLQQLHL GTAAHNYFQA SSSSTVYNGG GYQQGTSGNA FLMPASTVVD EQGHSSTATN 600 QGSTCSYGDE DGKLNLGYDA MAMASTGADP YAAAPTVSIA RANGYSNNWS SPFNGM

Sequence ? help Back to Top

Protein Sequence Length: 656 aa Download sequence

MASGNDWLGF SLSGQENPQP HQDSSPPADI DIVGASGFYG LPTQPAPDAQ LGVPGHHQPS  60
YGITEAFNRG AHEIHDWNMR GDLDYNGGAS ELSMLVGSSA VGGKRAAMEA ETEPKLEDFL  120
VGNSFVSEQD QAGGFLFSGV PMATSTNSNS RSNTMELSMI KSWLRDNQVP QAPHPQSQTG  180
APAQQPQPHE EMGTDASSFD PLGRNGALVV AGSSQSLALS MSTGSGSHLP MAVLGGSPSG  240
GVSESTSSEN KRASGAMDSP GGAVEAVARK SIDTFGQRTS IYRGVTRHRW TGRYEAHLWD  300
NSCRREGQSR KGRQGGYDKE DKAARAYDLA ALKYWGTTTT TNFPINTYEK EVDEMKHMTR  360
QEYIAYLRRN SSGFSRGASK YRGVTRHHQH GRWQARIGRV AGNKDLYLGT FSTEEEAAEA  420
YDIAAIKFRG LNAVTNFDMS RYDVKTILES STLPVGGAAR RPKEVADHPE AGATIWRAGM  480
DGGVISQLTD VGMGTYASYH HGWPTIAFQQ PSPLSVHYPY VAQPSRGWCK PEQDASVATQ  540
SLQDLQQLHL GTAAHNYFQA SSSSTVYNGG GYQQGTSGNA FLMPASTVVD EQGHSSTATN  600
QGSTCSYGDE DGKLNLGYDA MAMASTGADP YAAAPTVSIA RANGYSNNWS SPFNGM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	1e-114	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG034450.1