PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG033880.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family CO-like
Protein Properties Length: 320aa    MW: 33437.1 Da    PI: 4.9716
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG033880.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box23.51.1e-072057438
          zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg....Ht 38
                      r C+++    ++l+C++++ +lC+ C    H g    H 
  TRIDC6AG033880.1 20 RPCDTCAVDAARLYCRSDGAYLCAGCDARAH-GagsrHA 57
                      68*****999******************999.4466675 PP
2zf-B_box23.51.2e-0759103341
          zf-B_box   3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 
                        + C+ +e+ ++   C+ +   lC++C   +H+       H++ p
  TRIDC6AG033880.1  59 VWLCEVCEHAPAAVTCRADAAALCATCDADIHSAnplasrHERLP 103
                       679*****************************6688888898876 PP
3CCT691.2e-23243286144
               CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                       Rea+l+RY+eKrk+R+F+K+irY+sRKa+Ae+RpR+KGrF+k++
  TRIDC6AG033880.1 243 REARLMRYREKRKNRRFQKTIRYASRKAYAETRPRIKGRFAKRT 286
                       9****************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
EDQTVVGGGG GGGLWGLAGR PCDTCAVDAA RLYCRSDGAY LCAGCDARAH GAGSRHARVW  60
LCEVCEHAPA AVTCRADAAA LCATCDADIH SANPLASRHE RLPVTPFLGG LADPPQPAPS  120
PSSAAATQED ADDDGSNEAE AASWLLPEPG DSPEDSTATF FADSDAYLDL DFVRSMDGIK  180
AIGVPVAPSK LDLAGGALFY PEHSMNQSMS TSEVAVVPDA LSAGGAPAPA PSVAVVASKG  240
KEREARLMRY REKRKNRRFQ KTIRYASRKA YAETRPRIKG RFAKRTAEDD ALEQDGPFSP  300
ASSAHLASEG DYGVVPSLCT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24790.11e-45CO-like family protein