PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG029960.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 347aa    MW: 37896.6 Da    PI: 6.9032
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG029960.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix38.82.5e-12276986
          trihelix  9 aLiearremeerlrrgklkkplWeevskkm.rergfer...spkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                      +Li+a  e+  +l+rg+l+ p+W+ev++++ ++ g+++   s +qCk++++ l+k+yk +k+ + +       ++p+fd+l+
  TRIDC6AG029960.1  2 TLIDAWGERFVALGRGSLRHPQWQEVAEVVsSRDGYSKppkSDVQCKNRIDTLKKKYKVEKAKSDS-------SWPFFDRLD 76
                      6999999***********************87889976333778***************9998886.......5*****997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
STLIDAWGER FVALGRGSLR HPQWQEVAEV VSSRDGYSKP PKSDVQCKNR IDTLKKKYKV  60
EKAKSDSSWP FFDRLDFLLA PVQKLLGNSG GAAGNFGSSN PSNRSTAPMA PRVNFPQRTR  120
TAFPSIGMKR RLPSPPQASA SSESSDGFPP EPLAEAVNGK RQRLEESANG ADSSDRAQGL  180
RDLAQAIRRL GETYERVESS KGEHELRMER NRLDAARELE DQRVQFFLKM EMEISKANNG  240
APLAVPLAAA AMVGNSASTA EDGDSPATAD GNGPRRASMA TDVRASSNHH VRYRVKDDRH  300
HHASRRPSYQ YNQNNVGAAD AGGIGSGSDS GNKEDEEEME GEEEESQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11100.13e-36Trihelix family protein