PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG029750.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 307aa MW: 34058.3 Da PI: 6.9503

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG029750.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.3	8.3e-09	2	30	16	45
HHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 16 vkqlGggtWktIartmgkgRtlkqcksrwq 45 ++++G ++W t+a+ ++ gR++ qc+ rw+ TRIDC6AG029750.7 2 INKHGLKNWQTVAHAIP-GRSAPQCRQRWR 30 689************.*********8 PP
2	Myb_DNA-binding	39.3	1.5e-12	39	81	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +W+++E+++l++a++ +G++ W+ ++++ gRt +k++w+ TRIDC6AG029750.7 39 KEAWSEQEELRLIRAHQIYGTK-WREMVKHFP-GRTNGAIKEYWR 81 579*****************.*****.*********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MINKHGLKNW QTVAHAIPGR SAPQCRQRWR YKIDSAINKE AWSEQEELRL IRAHQIYGTK 60 WREMVKHFPG RTNGAIKEYW RGPMKRKLNS YLSSGLLEQF PDILENLSGT QNKSLDILKG 120 TKVSDILNDT EGSSERNEMS SAVPRISISE VGFTEVGENA DVLGGESADF MYARVASAKA 180 PENIIARSEQ HAKTRRKLDL LSSPVELKSS SYEVNSQRSL QQREQMSPAV GGVSPSNGCH 240 DVLPKILSEC AKPVLSPTGS YQPSDVHSAG TSDPCSLELD ISDLMEMSYF DNLLIFPPGS 300 PHDGNSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11510.1	1e-35	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG029750.7