PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG029750.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 463aa MW: 51649.1 Da PI: 8.8854

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG029750.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46	1.2e-14	143	186	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +W++eE + l++ ++++G ++W t+a+ ++ gR++ qc+ rw+ TRIDC6AG029750.3 143 RVKWSEEENKVLAQMINKHGLKNWQTVAHAIP-GRSAPQCRQRWR 186 789***************************.*********8 PP
2	Myb_DNA-binding	38.5	2.7e-12	195	237	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +W+++E+++l++a++ +G++ W+ ++++ gRt +k++w+ TRIDC6AG029750.3 195 KEAWSEQEELRLIRAHQIYGTK-WREMVKHFP-GRTNGAIKEYWR 237 579*****************.*****.*********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
HHHLALLSPR ARRQRQRASH SHPSHLFLLG PLLRILHRGE LRRSGLNPAA TAFSRCFWRT 60 RGFFPAMSRI GDLMPRERSV NSTSHSRKAD GDSANVSGTP HDTAKHCHDE ELGNIGFRGQ 120 LCKNDGHSFK ESCSITNSEV LTRVKWSEEE NKVLAQMINK HGLKNWQTVA HAIPGRSAPQ 180 CRQRWRYKID SAINKEAWSE QEELRLIRAH QIYGTKWREM VKHFPGRTNG AIKEYWRGPM 240 KRKLNSYLSS GLLEQFPDIL ENLSGTQNKS LDILKGTKVS DILNDTEGSS ERNEMSSAVP 300 RISISEVGFT EVGENADVLG GESADFMYAR VASAKAPENI IARSEQHAKT RRKLDLLSSP 360 VELKSSSYEV NSQRSLQQRE QMSPAVGGVS PSNGCHDVLP KILSECAKPV LSPTGSYQPS 420 DVHSAGTSDP CSLELDISDL MEMSYFDNLL IFPPGSPHDG NSI

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

HHHLALLSPR ARRQRQRASH SHPSHLFLLG PLLRILHRGE LRRSGLNPAA TAFSRCFWRT  60
RGFFPAMSRI GDLMPRERSV NSTSHSRKAD GDSANVSGTP HDTAKHCHDE ELGNIGFRGQ  120
LCKNDGHSFK ESCSITNSEV LTRVKWSEEE NKVLAQMINK HGLKNWQTVA HAIPGRSAPQ  180
CRQRWRYKID SAINKEAWSE QEELRLIRAH QIYGTKWREM VKHFPGRTNG AIKEYWRGPM  240
KRKLNSYLSS GLLEQFPDIL ENLSGTQNKS LDILKGTKVS DILNDTEGSS ERNEMSSAVP  300
RISISEVGFT EVGENADVLG GESADFMYAR VASAKAPENI IARSEQHAKT RRKLDLLSSP  360
VELKSSSYEV NSQRSLQQRE QMSPAVGGVS PSNGCHDVLP KILSECAKPV LSPTGSYQPS  420
DVHSAGTSDP CSLELDISDL MEMSYFDNLL IFPPGSPHDG NSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11510.1	1e-38	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG029750.3