PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG029750.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 454aa MW: 50797.1 Da PI: 8.7257

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG029750.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46	1.2e-14	134	177	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +W++eE + l++ ++++G ++W t+a+ ++ gR++ qc+ rw+ TRIDC6AG029750.2 134 RVKWSEEENKVLAQMINKHGLKNWQTVAHAIP-GRSAPQCRQRWR 177 789***************************.*********8 PP
2	Myb_DNA-binding	38.5	2.6e-12	186	228	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +W+++E+++l++a++ +G++ W+ ++++ gRt +k++w+ TRIDC6AG029750.2 186 KEAWSEQEELRLIRAHQIYGTK-WREMVKHFP-GRTNGAIKEYWR 228 579*****************.*****.*********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence
HHHLALLSPR ARRQRQRASH SHPSHLFLLG PLLRILHRGE LRSFSRCFWR TRGFFPAMSR 60 IGDLMPRERS VNSTSHSRKA DGDSANVSGT PHDTAKHCHD EELGNIGFRG QLCKNDGHSF 120 KESCSITNSE VLTRVKWSEE ENKVLAQMIN KHGLKNWQTV AHAIPGRSAP QCRQRWRYKI 180 DSAINKEAWS EQEELRLIRA HQIYGTKWRE MVKHFPGRTN GAIKEYWRGP MKRKLNSYLS 240 SGLLEQFPDI LENLSGTQNK SLDILKGTKV SDILNDTEGS SERNEMSSAV PRISISEVGF 300 TEVGENADVL GGESADFMYA RVASAKAPEN IIARSEQHAK TRRKLDLLSS PVELKSSSYE 360 VNSQRSLQQR EQMSPAVGGV SPSNGCHDVL PKILSECAKP VLSPTGSYQP SDVHSAGTSD 420 PCSLELDISD LMEMSYFDNL LIFPPGSPHD GNSI

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence

HHHLALLSPR ARRQRQRASH SHPSHLFLLG PLLRILHRGE LRSFSRCFWR TRGFFPAMSR  60
IGDLMPRERS VNSTSHSRKA DGDSANVSGT PHDTAKHCHD EELGNIGFRG QLCKNDGHSF  120
KESCSITNSE VLTRVKWSEE ENKVLAQMIN KHGLKNWQTV AHAIPGRSAP QCRQRWRYKI  180
DSAINKEAWS EQEELRLIRA HQIYGTKWRE MVKHFPGRTN GAIKEYWRGP MKRKLNSYLS  240
SGLLEQFPDI LENLSGTQNK SLDILKGTKV SDILNDTEGS SERNEMSSAV PRISISEVGF  300
TEVGENADVL GGESADFMYA RVASAKAPEN IIARSEQHAK TRRKLDLLSS PVELKSSSYE  360
VNSQRSLQQR EQMSPAVGGV SPSNGCHDVL PKILSECAKP VLSPTGSYQP SDVHSAGTSD  420
PCSLELDISD LMEMSYFDNL LIFPPGSPHD GNSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11510.1	1e-38	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG029750.2