PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG029750.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 315aa    MW: 34973.4 Da    PI: 6.7214
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG029750.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.31.3e-11238845
                       HHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
    Myb_DNA-binding  8 EdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                       Ed+ l++ ++++G ++W t+a+ ++ gR++ qc+ rw+
  TRIDC6AG029750.10  2 EDKVLAQMINKHGLKNWQTVAHAIP-GRSAPQCRQRWR 38
                       9************************.***********8 PP
2Myb_DNA-binding39.21.6e-124789145
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                       + +W+++E+++l++a++ +G++ W+   ++++ gRt   +k++w+
  TRIDC6AG029750.10 47 KEAWSEQEELRLIRAHQIYGTK-WREMVKHFP-GRTNGAIKEYWR 89
                       579*******************.*********.***********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MEDKVLAQMI NKHGLKNWQT VAHAIPGRSA PQCRQRWRYK IDSAINKEAW SEQEELRLIR  60
AHQIYGTKWR EMVKHFPGRT NGAIKEYWRG PMKRKLNSYL SSGLLEQFPD ILENLSGTQN  120
KSLDILKGTK VSDILNDTEG SSERNEMSSA VPRISISEVG FTEVGENADV LGGESADFMY  180
ARVASAKAPE NIIARSEQHA KTRRKLDLLS SPVELKSSSY EVNSQRSLQQ REQMSPAVGG  240
VSPSNGCHDV LPKILSECAK PVLSPTGSYQ PSDVHSAGTS DPCSLELDIS DLMEMSYFDN  300
LLIFPPGSPH DGNSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11510.13e-38MYB family protein