PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG029350.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 431aa MW: 48589.8 Da PI: 8.9344

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG029350.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	62	1.4e-19	343	423	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +e++ Li++r em+e++++ k ++ lWee+s + ++g++r+p qCk+ w +l ++y++ k+ e++ +t++yf+ ++ TRIDC6AG029350.9 343 KWKPEEIKSLIQLRGEMNEKFQTVKGRMVLWEEISGSLLKQGITRTPAQCKSVWTSLLQKYEESKKDEEN-----MRTWQYFSAMD 423 7***************************************************************9998.....479****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MKMLNRLTDL GPKIVMGKDA GLHTSGHAYH DELEEVLQIV KPQHFLPVHG ELLFLKEHEL 60 LGRSTGIKHT TVIKNGEMLG VSHLRNRKVL SNGFVSLGKQ DFKLMYSDGD KAFGTSTDLC 120 IDERFRIASD GIIFVSMEIF RPKPASPQSG LKGKFKITTR CLWLDNGRLL DALYKAVHAA 180 LSSCPLNCPL SHMERMVSEI LRKMVRKYSG KRPDVIVVAS ENTTVGFSEE VINRHMSLVD 240 YEKTRPENPE REAEESIPEV MRTTPDDATT SSNGESFFSP DLHQPKTLDH FWESFKSPTA 300 VKIARIVNAS AQGNKPKLGK ISIIDKDSST SAPAPAKSSR KNKWKPEEIK SLIQLRGEMN 360 EKFQTVKGRM VLWEEISGSL LKQGITRTPA QCKSVWTSLL QKYEESKKDE ENMRTWQYFS 420 AMDSFLSCEG E

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MKMLNRLTDL GPKIVMGKDA GLHTSGHAYH DELEEVLQIV KPQHFLPVHG ELLFLKEHEL  60
LGRSTGIKHT TVIKNGEMLG VSHLRNRKVL SNGFVSLGKQ DFKLMYSDGD KAFGTSTDLC  120
IDERFRIASD GIIFVSMEIF RPKPASPQSG LKGKFKITTR CLWLDNGRLL DALYKAVHAA  180
LSSCPLNCPL SHMERMVSEI LRKMVRKYSG KRPDVIVVAS ENTTVGFSEE VINRHMSLVD  240
YEKTRPENPE REAEESIPEV MRTTPDDATT SSNGESFFSP DLHQPKTLDH FWESFKSPTA  300
VKIARIVNAS AQGNKPKLGK ISIIDKDSST SAPAPAKSSR KNKWKPEEIK SLIQLRGEMN  360
EKFQTVKGRM VLWEEISGSL LKQGITRTPA QCKSVWTSLL QKYEESKKDE ENMRTWQYFS  420
AMDSFLSCEG E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	1e-155	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG029350.9