PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG029350.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 898aa MW: 99788.8 Da PI: 9.0967

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG029350.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	60.6	4e-19	806	886	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +e++ Li++r em+e++++ k ++ lWee+s + ++g++r+p qCk+ w +l ++y++ k+ e++ +t++yf+ ++ TRIDC6AG029350.6 806 KWKPEEIKSLIQLRGEMNEKFQTVKGRMVLWEEISGSLLKQGITRTPAQCKSVWTSLLQKYEESKKDEEN-----MRTWQYFSAMD 886 7***************************************************************9998.....479****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 898 aa Download sequence
LFRCSYTLAA IQTLTSQPRH LRYPIRSLAV CAPLHSAPHP TPAHAAAMVA LASLSSLCLC 60 GSARRRSASA PTSISCCVLA TPSGRGSHES RIPRRRFRRT ECATKSMEDS VKRKMEQFYE 120 GVDGPPLRVL PIGGLGEIGM NCMLVGNYDR YILIDAGVMF PDYDEFGVQK IIPDTTFIKK 180 WSHKIEAVII THGHEDHIGA LPWVIPALDS TTPIFASSFT MELIKKRLKE FGIFLSSRLK 240 SFRVRNRFQA GPFEVEPIRV THSIPDCCGL VLRCGDGTIF HTGDWKIDES PVDGRIFDRE 300 ALEELSKEGV TLMMSDSTNI LSPGRSTSES VVASSLLRHV SEAKGRRVIT TQFASNIHRI 360 GSIKAAADLT GRRLVFVGMS LRTYLEAAFR DGKAPLDPST LVKAEDMDAY DPKNLLVVTT 420 GSQAEPRAAL NLASYGGSHA LKLSKEDVLL YSAKVIPGNE SRVMKMLNRL TDLGPKIVMG 480 KDAGLHTSGH AYHDELEEVL QIVKPQHFLP VHGELLFLKE HELLGRSTGI KHTTVIKNGE 540 MLGVSHLRNR KVLSNGFVSL GKQDFKLMYS DGDKAFGTST DLCIDERFRI ASDGIIFVSM 600 EIFRPKPASP QSGLKGKFKI TTRCLWLDNG RLLDALYKAV HAALSSCPLN CPLSHMERMV 660 SEILRKMVRK YSGKRPDVIV VASENTTVGF SEEVINRHMS LVDYEKTRPE NPEREAEESI 720 PEVMRTTPDD ATTSSNGESF FSPDLHQPKT LDHFWESFKS PTAVKIARIV NASAQGNKPK 780 LGKISIIDKD SSTSAPAPAK SSRKNKWKPE EIKSLIQLRG EMNEKFQTVK GRMVLWEEIS 840 GSLLKQGITR TPAQCKSVWT SLLQKYEESK KDEENMRTWQ YFSAMDSFLS CEGEMATK

Sequence ? help Back to Top

Protein Sequence Length: 898 aa Download sequence

LFRCSYTLAA IQTLTSQPRH LRYPIRSLAV CAPLHSAPHP TPAHAAAMVA LASLSSLCLC  60
GSARRRSASA PTSISCCVLA TPSGRGSHES RIPRRRFRRT ECATKSMEDS VKRKMEQFYE  120
GVDGPPLRVL PIGGLGEIGM NCMLVGNYDR YILIDAGVMF PDYDEFGVQK IIPDTTFIKK  180
WSHKIEAVII THGHEDHIGA LPWVIPALDS TTPIFASSFT MELIKKRLKE FGIFLSSRLK  240
SFRVRNRFQA GPFEVEPIRV THSIPDCCGL VLRCGDGTIF HTGDWKIDES PVDGRIFDRE  300
ALEELSKEGV TLMMSDSTNI LSPGRSTSES VVASSLLRHV SEAKGRRVIT TQFASNIHRI  360
GSIKAAADLT GRRLVFVGMS LRTYLEAAFR DGKAPLDPST LVKAEDMDAY DPKNLLVVTT  420
GSQAEPRAAL NLASYGGSHA LKLSKEDVLL YSAKVIPGNE SRVMKMLNRL TDLGPKIVMG  480
KDAGLHTSGH AYHDELEEVL QIVKPQHFLP VHGELLFLKE HELLGRSTGI KHTTVIKNGE  540
MLGVSHLRNR KVLSNGFVSL GKQDFKLMYS DGDKAFGTST DLCIDERFRI ASDGIIFVSM  600
EIFRPKPASP QSGLKGKFKI TTRCLWLDNG RLLDALYKAV HAALSSCPLN CPLSHMERMV  660
SEILRKMVRK YSGKRPDVIV VASENTTVGF SEEVINRHMS LVDYEKTRPE NPEREAEESI  720
PEVMRTTPDD ATTSSNGESF FSPDLHQPKT LDHFWESFKS PTAVKIARIV NASAQGNKPK  780
LGKISIIDKD SSTSAPAPAK SSRKNKWKPE EIKSLIQLRG EMNEKFQTVK GRMVLWEEIS  840
GSLLKQGITR TPAQCKSVWT SLLQKYEESK KDEENMRTWQ YFSAMDSFLS CEGEMATK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG029350.6