PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG029350.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 678aa MW: 75684.9 Da PI: 9.2178

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG029350.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	61.1	2.7e-19	586	666	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +e++ Li++r em+e++++ k ++ lWee+s + ++g++r+p qCk+ w +l ++y++ k+ e++ +t++yf+ ++ TRIDC6AG029350.5 586 KWKPEEIKSLIQLRGEMNEKFQTVKGRMVLWEEISGSLLKQGITRTPAQCKSVWTSLLQKYEESKKDEEN-----MRTWQYFSAMD 666 7***************************************************************9998.....479****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 678 aa Download sequence
MELIKKRLKE FGIFLSSRLK SFRVRNRFQA GPFEVEPIRV THSIPDCCGL VLRCGDGTIF 60 HTGDWKIDES PVDGRIFDRE ALEELSKEGV TLMMSDSTNI LSPGRSTSES VVASSLLRHV 120 SEAKGRRVIT TQFASNIHRI GSIKAAADLT GRRLVFVGMS LRTYLEAAFR DGKAPLDPST 180 LVKAEDMDAY DPKNLLVVTT GSQAEPRAAL NLASYGGSHA LKLSKEDVLL YSAKVIPGNE 240 SRVMKMLNRL TDLGPKIVMG KDAGLHTSGH AYHDELEEVL QIVKPQHFLP VHGELLFLKE 300 HELLGRSTGI KHTTVIKNGE MLGVSHLRNR KVLSNGFVSL GKQDFKLMYS DGDKAFGTST 360 DLCIDERFRI ASDGIIFVSM EIFRPKPASP QSGLKGKFKI TTRCLWLDNG RLLDALYKAV 420 HAALSSCPLN CPLSHMERMV SEILRKMVRK YSGKRPDVIV VASENTTVGF SEEVINRHMS 480 LVDYEKTRPE NPEREAEESI PEVMRTTPDD ATTSSNGESF FSPDLHQPKT LDHFWESFKS 540 PTAVKIARIV NASAQGNKPK LGKISIIDKD SSTSAPAPAK SSRKNKWKPE EIKSLIQLRG 600 EMNEKFQTVK GRMVLWEEIS GSLLKQGITR TPAQCKSVWT SLLQKYEESK KDEENMRTWQ 660 YFSAMDSFLS CEGEMATK

Sequence ? help Back to Top

Protein Sequence Length: 678 aa Download sequence

MELIKKRLKE FGIFLSSRLK SFRVRNRFQA GPFEVEPIRV THSIPDCCGL VLRCGDGTIF  60
HTGDWKIDES PVDGRIFDRE ALEELSKEGV TLMMSDSTNI LSPGRSTSES VVASSLLRHV  120
SEAKGRRVIT TQFASNIHRI GSIKAAADLT GRRLVFVGMS LRTYLEAAFR DGKAPLDPST  180
LVKAEDMDAY DPKNLLVVTT GSQAEPRAAL NLASYGGSHA LKLSKEDVLL YSAKVIPGNE  240
SRVMKMLNRL TDLGPKIVMG KDAGLHTSGH AYHDELEEVL QIVKPQHFLP VHGELLFLKE  300
HELLGRSTGI KHTTVIKNGE MLGVSHLRNR KVLSNGFVSL GKQDFKLMYS DGDKAFGTST  360
DLCIDERFRI ASDGIIFVSM EIFRPKPASP QSGLKGKFKI TTRCLWLDNG RLLDALYKAV  420
HAALSSCPLN CPLSHMERMV SEILRKMVRK YSGKRPDVIV VASENTTVGF SEEVINRHMS  480
LVDYEKTRPE NPEREAEESI PEVMRTTPDD ATTSSNGESF FSPDLHQPKT LDHFWESFKS  540
PTAVKIARIV NASAQGNKPK LGKISIIDKD SSTSAPAPAK SSRKNKWKPE EIKSLIQLRG  600
EMNEKFQTVK GRMVLWEEIS GSLLKQGITR TPAQCKSVWT SLLQKYEESK KDEENMRTWQ  660
YFSAMDSFLS CEGEMATK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG029350.5