PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG029350.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 665aa MW: 74026.2 Da PI: 9.2232

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG029350.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	61.1	2.6e-19	573	653	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +e++ Li++r em+e++++ k ++ lWee+s + ++g++r+p qCk+ w +l ++y++ k+ e++ +t++yf+ ++ TRIDC6AG029350.4 573 KWKPEEIKSLIQLRGEMNEKFQTVKGRMVLWEEISGSLLKQGITRTPAQCKSVWTSLLQKYEESKKDEEN-----MRTWQYFSAMD 653 7***************************************************************9998.....479****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 665 aa Download sequence
MAMKITSVIP ALDSTTPIFA SSFTMELIKK RLKEFGIFLS SRLKSFRVRN RFQAGPFEVE 60 PIRVTHSIPD CCGLVLRCGD GTIFHTGDWK IDESPVDGRI FDREALEELS KEGVTLMMSD 120 STNILSPGRS TSESVVASSL LRHVSEAKGR RVITTQFASN IHRIGSIKAA ADLTGRRLVF 180 VGMSLRTYLE AAFRDGKAPL DPSTLVKAED MDAYDPKNLL VVTTGSQAEP RAALNLASYG 240 GSHALKLSKE DVLLYSAKVI PGNESRVMKM LNRLTDLGPK IVMGKDAGLH TSGHAYHDEL 300 EEVLQIVKPQ HFLPVHGELL FLKEHELLGR STGIKHTTVI KNGEMLGVSH LRNRKVLSNG 360 FVSLGKQDFK LMYSDGDKAF GTSTDLCIDE RFRIASDGII FVSMEIFRPK PASPQSGLKG 420 KFKITTRCLW LDNGRLLDAL YKAVHAALSS CPLNCPLSHM ERMVSEILRK MVRKYSGKRP 480 DVIVVASENT TVGFSEEVIN RHMSLVDYEK TRPENPEREA EESIPEVMRT TPDDATTSSN 540 AQGNKPKLGK ISIIDKDSST SAPAPAKSSR KNKWKPEEIK SLIQLRGEMN EKFQTVKGRM 600 VLWEEISGSL LKQGITRTPA QCKSVWTSLL QKYEESKKDE ENMRTWQYFS AMDSFLSCEG 660 EMATK

Sequence ? help Back to Top

Protein Sequence Length: 665 aa Download sequence

MAMKITSVIP ALDSTTPIFA SSFTMELIKK RLKEFGIFLS SRLKSFRVRN RFQAGPFEVE  60
PIRVTHSIPD CCGLVLRCGD GTIFHTGDWK IDESPVDGRI FDREALEELS KEGVTLMMSD  120
STNILSPGRS TSESVVASSL LRHVSEAKGR RVITTQFASN IHRIGSIKAA ADLTGRRLVF  180
VGMSLRTYLE AAFRDGKAPL DPSTLVKAED MDAYDPKNLL VVTTGSQAEP RAALNLASYG  240
GSHALKLSKE DVLLYSAKVI PGNESRVMKM LNRLTDLGPK IVMGKDAGLH TSGHAYHDEL  300
EEVLQIVKPQ HFLPVHGELL FLKEHELLGR STGIKHTTVI KNGEMLGVSH LRNRKVLSNG  360
FVSLGKQDFK LMYSDGDKAF GTSTDLCIDE RFRIASDGII FVSMEIFRPK PASPQSGLKG  420
KFKITTRCLW LDNGRLLDAL YKAVHAALSS CPLNCPLSHM ERMVSEILRK MVRKYSGKRP  480
DVIVVASENT TVGFSEEVIN RHMSLVDYEK TRPENPEREA EESIPEVMRT TPDDATTSSN  540
AQGNKPKLGK ISIIDKDSST SAPAPAKSSR KNKWKPEEIK SLIQLRGEMN EKFQTVKGRM  600
VLWEEISGSL LKQGITRTPA QCKSVWTSLL QKYEESKKDE ENMRTWQYFS AMDSFLSCEG  660
EMATK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG029350.4