PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG029350.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 417aa MW: 47102.2 Da PI: 9.1351

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG029350.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	62.1	1.3e-19	325	405	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +e++ Li++r em+e++++ k ++ lWee+s + ++g++r+p qCk+ w +l ++y++ k+ e++ +t++yf+ ++ TRIDC6AG029350.3 325 KWKPEEIKSLIQLRGEMNEKFQTVKGRMVLWEEISGSLLKQGITRTPAQCKSVWTSLLQKYEESKKDEEN-----MRTWQYFSAMD 405 7***************************************************************9998.....479****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MLASIHLGML ITMNWEEVLQ IVKPQHFLPV HGELLFLKEH ELLGRSTGIK HTTVIKNGEM 60 LGVSHLRNRK VLSNGFVSLG KQDFKLMYSD GDKAFGTSTD LCIDERFRIA SDGIIFVSME 120 IFRPKPASPQ SGLKGKFKIT TRCLWLDNGR LLDALYKAVH AALSSCPLNC PLSHMERMVS 180 EILRKMVRKY SGKRPDVIVV ASENTTVGFS EEVINRHMSL VDYEKTRPEN PEREAEESIP 240 EVMRTTPDDA TTSSNGESFF SPDLHQPKTL DHFWESFKSP TAVKIARIVN ASAQGNKPKL 300 GKISIIDKDS STSAPAPAKS SRKNKWKPEE IKSLIQLRGE MNEKFQTVKG RMVLWEEISG 360 SLLKQGITRT PAQCKSVWTS LLQKYEESKK DEENMRTWQY FSAMDSFLSC EGEMATK

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MLASIHLGML ITMNWEEVLQ IVKPQHFLPV HGELLFLKEH ELLGRSTGIK HTTVIKNGEM  60
LGVSHLRNRK VLSNGFVSLG KQDFKLMYSD GDKAFGTSTD LCIDERFRIA SDGIIFVSME  120
IFRPKPASPQ SGLKGKFKIT TRCLWLDNGR LLDALYKAVH AALSSCPLNC PLSHMERMVS  180
EILRKMVRKY SGKRPDVIVV ASENTTVGFS EEVINRHMSL VDYEKTRPEN PEREAEESIP  240
EVMRTTPDDA TTSSNGESFF SPDLHQPKTL DHFWESFKSP TAVKIARIVN ASAQGNKPKL  300
GKISIIDKDS STSAPAPAKS SRKNKWKPEE IKSLIQLRGE MNEKFQTVKG RMVLWEEISG  360
SLLKQGITRT PAQCKSVWTS LLQKYEESKK DEENMRTWQY FSAMDSFLSC EGEMATK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	1e-137	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG029350.3