PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG029350.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 739aa MW: 82282.7 Da PI: 9.5086

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG029350.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	60.9	3e-19	647	727	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +e++ Li++r em+e++++ k ++ lWee+s + ++g++r+p qCk+ w +l ++y++ k+ e++ +t++yf+ ++ TRIDC6AG029350.2 647 KWKPEEIKSLIQLRGEMNEKFQTVKGRMVLWEEISGSLLKQGITRTPAQCKSVWTSLLQKYEESKKDEEN-----MRTWQYFSAMD 727 7***************************************************************9998.....479****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 739 aa Download sequence
MQGLCSQTTT SLVCKRLFPT QLSSRNGATK LKQLLLHMAM KITSVIPALD STTPIFASSF 60 TMELIKKRLK EFGIFLSSRL KSFRVRNRFQ AGPFEVEPIR VTHSIPDCCG LVLRCGDGTI 120 FHTGDWKIDE SPVDGRIFDR EALEELSKEG VTLMMSDSTN ILSPGRSTSE SVVASSLLRH 180 VSEAKGRRVI TTQFASNIHR IGSIKAAADL TGRRLVFVGM SLRTYLEAAF RDGKAPLDPS 240 TLVKAEDMDA YDPKNLLVVT TGSQAEPRAA LNLASYGGSH ALKLSKEDVL LYSAKVIPGN 300 ESRVMKMLNR LTDLGPKIVM GKDAGLHTSG HAYHDELEEV LQIVKPQHFL PVHGELLFLK 360 EHELLGRSTG IKHTTVIKNG EMLGVSHLRN RKVLSNGFVS LGKQDFKLMY SDGDKAFGTS 420 TDLCIDERFR IASDGIIFVS MEIFRPKPAS PQSGLKGKFK ITTRCLWLDN GRLLDALYKA 480 VHAALSSCPL NCPLSHMERM VSEILRKMVR KYSGKRPDVI VVASENTTVG FSEEVINRHM 540 SLVDYEKTRP ENPEREAEES IPEVMRTTPD DATTSSNGES FFSPDLHQPK TLDHFWESFK 600 SPTAVKIARI VNASAQGNKP KLGKISIIDK DSSTSAPAPA KSSRKNKWKP EEIKSLIQLR 660 GEMNEKFQTV KGRMVLWEEI SGSLLKQGIT RTPAQCKSVW TSLLQKYEES KKDEENMRTW 720 QYFSAMDSFL SCEGEMATK

Sequence ? help Back to Top

Protein Sequence Length: 739 aa Download sequence

MQGLCSQTTT SLVCKRLFPT QLSSRNGATK LKQLLLHMAM KITSVIPALD STTPIFASSF  60
TMELIKKRLK EFGIFLSSRL KSFRVRNRFQ AGPFEVEPIR VTHSIPDCCG LVLRCGDGTI  120
FHTGDWKIDE SPVDGRIFDR EALEELSKEG VTLMMSDSTN ILSPGRSTSE SVVASSLLRH  180
VSEAKGRRVI TTQFASNIHR IGSIKAAADL TGRRLVFVGM SLRTYLEAAF RDGKAPLDPS  240
TLVKAEDMDA YDPKNLLVVT TGSQAEPRAA LNLASYGGSH ALKLSKEDVL LYSAKVIPGN  300
ESRVMKMLNR LTDLGPKIVM GKDAGLHTSG HAYHDELEEV LQIVKPQHFL PVHGELLFLK  360
EHELLGRSTG IKHTTVIKNG EMLGVSHLRN RKVLSNGFVS LGKQDFKLMY SDGDKAFGTS  420
TDLCIDERFR IASDGIIFVS MEIFRPKPAS PQSGLKGKFK ITTRCLWLDN GRLLDALYKA  480
VHAALSSCPL NCPLSHMERM VSEILRKMVR KYSGKRPDVI VVASENTTVG FSEEVINRHM  540
SLVDYEKTRP ENPEREAEES IPEVMRTTPD DATTSSNGES FFSPDLHQPK TLDHFWESFK  600
SPTAVKIARI VNASAQGNKP KLGKISIIDK DSSTSAPAPA KSSRKNKWKP EEIKSLIQLR  660
GEMNEKFQTV KGRMVLWEEI SGSLLKQGIT RTPAQCKSVW TSLLQKYEES KKDEENMRTW  720
QYFSAMDSFL SCEGEMATK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG029350.2