PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG029350.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 488aa MW: 54631.6 Da PI: 8.894

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG029350.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	61.8	1.7e-19	400	480	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +e++ Li++r em+e++++ k ++ lWee+s + ++g++r+p qCk+ w +l ++y++ k+ e++ +t++yf+ ++ TRIDC6AG029350.10 400 KWKPEEIKSLIQLRGEMNEKFQTVKGRMVLWEEISGSLLKQGITRTPAQCKSVWTSLLQKYEESKKDEEN-----MRTWQYFSAMD 480 7***************************************************************9998.....479****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MDAYDPKNLL VVTTGSQAEP RAALNLASYG GSHALKLSKE DVLLYSAKVI PGNESRVMKM 60 LNRLTDLGPK IVMGKDAGLH TSGHAYHDEL EEVLQIVKPQ HFLPVHGELL FLKEHELLGR 120 STGIKHTTVI KNGEMLGVSH LRNRKVLSNG FVSLGKQDFK LMYSDGDKAF GTSTDLCIDE 180 RFRIASDGII FVSMEIFRPK PASPQSGLKG KFKITTRCLW LDNGRLLDAL YKAVHAALSS 240 CPLNCPLSHM ERMVSEILRK MVRKYSGKRP DVIVVASENT TVGFSEEVIN RHMSLVDYEK 300 TRPENPEREA EESIPEVMRT TPDDATTSSN GESFFSPDLH QPKTLDHFWE SFKSPTAVKI 360 ARIVNASAQG NKPKLGKISI IDKDSSTSAP APAKSSRKNK WKPEEIKSLI QLRGEMNEKF 420 QTVKGRMVLW EEISGSLLKQ GITRTPAQCK SVWTSLLQKY EESKKDEENM RTWQYFSAMD 480 SFLSCEGE

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MDAYDPKNLL VVTTGSQAEP RAALNLASYG GSHALKLSKE DVLLYSAKVI PGNESRVMKM  60
LNRLTDLGPK IVMGKDAGLH TSGHAYHDEL EEVLQIVKPQ HFLPVHGELL FLKEHELLGR  120
STGIKHTTVI KNGEMLGVSH LRNRKVLSNG FVSLGKQDFK LMYSDGDKAF GTSTDLCIDE  180
RFRIASDGII FVSMEIFRPK PASPQSGLKG KFKITTRCLW LDNGRLLDAL YKAVHAALSS  240
CPLNCPLSHM ERMVSEILRK MVRKYSGKRP DVIVVASENT TVGFSEEVIN RHMSLVDYEK  300
TRPENPEREA EESIPEVMRT TPDDATTSSN GESFFSPDLH QPKTLDHFWE SFKSPTAVKI  360
ARIVNASAQG NKPKLGKISI IDKDSSTSAP APAKSSRKNK WKPEEIKSLI QLRGEMNEKF  420
QTVKGRMVLW EEISGSLLKQ GITRTPAQCK SVWTSLLQKY EESKKDEENM RTWQYFSAMD  480
SFLSCEGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG029350.10