PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG029350.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Trihelix | ||||||||
Protein Properties | Length: 435aa MW: 49021.3 Da PI: 9.1084 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 62 | 1.4e-19 | 343 | 423 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +e++ Li++r em+e++++ k ++ lWee+s + ++g++r+p qCk+ w +l ++y++ k+ e++ +t++yf+ ++ TRIDC6AG029350.1 343 KWKPEEIKSLIQLRGEMNEKFQTVKGRMVLWEEISGSLLKQGITRTPAQCKSVWTSLLQKYEESKKDEEN-----MRTWQYFSAMD 423 7*****************************************************************9998.....479******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 435 aa Download sequence |
MKMLNRLTDL GPKIVMGKDA GLHTSGHAYH DELEEVLQIV KPQHFLPVHG ELLFLKEHEL 60 LGRSTGIKHT TVIKNGEMLG VSHLRNRKVL SNGFVSLGKQ DFKLMYSDGD KAFGTSTDLC 120 IDERFRIASD GIIFVSMEIF RPKPASPQSG LKGKFKITTR CLWLDNGRLL DALYKAVHAA 180 LSSCPLNCPL SHMERMVSEI LRKMVRKYSG KRPDVIVVAS ENTTVGFSEE VINRHMSLVD 240 YEKTRPENPE REAEESIPEV MRTTPDDATT SSNGESFFSP DLHQPKTLDH FWESFKSPTA 300 VKIARIVNAS AQGNKPKLGK ISIIDKDSST SAPAPAKSSR KNKWKPEEIK SLIQLRGEMN 360 EKFQTVKGRM VLWEEISGSL LKQGITRTPA QCKSVWTSLL QKYEESKKDE ENMRTWQYFS 420 AMDSFLSCEG EMATK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63420.1 | 1e-156 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG029350.1 |