PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG029230.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

E2F/DP

Protein Properties

Length: 462aa MW: 50718.6 Da PI: 4.7094

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG029230.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	80.8	1.2e-25	122	215	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse...........................dvknkrRRiYDilNVLealnliekkekne 66 r+++sL+llt+kf++ll+++e+gi++ln++a++L e +v ++RRiYDi+NVLe+++liek+ kn+ TRIDC6AG029230.9 122 RYDSSLGLLTKKFINLLKQAEDGILDLNNAAETL--EvtytllslqlilncfqliqishifptiQV--QKRRIYDITNVLEGIGLIEKTLKNR 210 6899****************************..668*******************6555..********************* PP E2F_TDP 67 irwkg 71 irwkg TRIDC6AG029230.9 211 IRWKG 215 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
TPSRPPFASP DDYHRFHAPT TPSATGSGGI GSGGVGGDID EGLVIRTQLK RKATREENNA 60 AESSDCMIVT TGVTGNPLLT PVSGKAVKNS KSKTKNNKAG PQTPTPNVGS PLNPSTPAGT 120 CRYDSSLGLL TKKFINLLKQ AEDGILDLNN AAETLEVTYT LLSLQLILNC FQLIQISHIF 180 PTIQVQKRRI YDITNVLEGI GLIEKTLKNR IRWKGLDDSG VELDNGLSGL QTEVENLNLQ 240 EQALDERISD MREKLRGLTE DENSQRWLYV TEDDIKGLPC FQNETLIAIK APHGTTLEVP 300 DPDEAGDYLQ RRYRIVLRST LGPIDVYLVS QFDDGFENLG GAATPPRHTN VPKPGPCEDL 360 HATNATQSSK SINVEYNIQH RQNTPQDPSS SNDYGGMTRI IPSDVNTDAD YWLLTEGDVS 420 ITDMWETAPE VQWDTAVFLP EDVSIPHAHH SPRMQVPSMD QP

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

TPSRPPFASP DDYHRFHAPT TPSATGSGGI GSGGVGGDID EGLVIRTQLK RKATREENNA  60
AESSDCMIVT TGVTGNPLLT PVSGKAVKNS KSKTKNNKAG PQTPTPNVGS PLNPSTPAGT  120
CRYDSSLGLL TKKFINLLKQ AEDGILDLNN AAETLEVTYT LLSLQLILNC FQLIQISHIF  180
PTIQVQKRRI YDITNVLEGI GLIEKTLKNR IRWKGLDDSG VELDNGLSGL QTEVENLNLQ  240
EQALDERISD MREKLRGLTE DENSQRWLYV TEDDIKGLPC FQNETLIAIK APHGTTLEVP  300
DPDEAGDYLQ RRYRIVLRST LGPIDVYLVS QFDDGFENLG GAATPPRHTN VPKPGPCEDL  360
HATNATQSSK SINVEYNIQH RQNTPQDPSS SNDYGGMTRI IPSDVNTDAD YWLLTEGDVS  420
ITDMWETAPE VQWDTAVFLP EDVSIPHAHH SPRMQVPSMD QP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-117	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG029230.9