PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG029230.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

E2F/DP

Protein Properties

Length: 456aa MW: 49748.5 Da PI: 4.95

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG029230.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	85.8	3.3e-27	153	218	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++ll+++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liek+ kn+irwkg TRIDC6AG029230.8 153 RYDSSLGLLTKKFINLLKQAEDGILDLNNAAETL---EV--QKRRIYDITNVLEGIGLIEKTLKNRIRWKG 218 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
RDREIGLMSG GGRPPAAQKI LQSLRPPPVF STPSRPPFAS PDDYHRFHAP TTPSATGSGG 60 IGSGGVGGDI DEGLVIRTQL KRKATREENN AAESSDCMIV TTGVTGNPLL TPVSGKAVKN 120 SKSKTKNNKA GPQTPTPNVG SPLNPSTPAG TCRYDSSLGL LTKKFINLLK QAEDGILDLN 180 NAAETLEVQK RRIYDITNVL EGIGLIEKTL KNRIRWKGLD DSGVELDNGL SGLQEQALDE 240 RISDMREKLR GLTEDENSQR WLYVTEDDIK GLPCFQNETL IAIKAPHGTT LEVPDPDEAG 300 DYLQRRYRIV LRSTLGPIDV YLVSQFDDGF ENLGGAATPP RHTNVPKPGP CEDLHATNAT 360 QSSKSINVEY NIQHRQNTPQ DPSSSNDYGG MTRIIPSDVN TDADYWLLTE GDVSITDMWE 420 TAPEVQWDTA VFLPEDVSIP HAHHSPRMQV PSMDQP

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

RDREIGLMSG GGRPPAAQKI LQSLRPPPVF STPSRPPFAS PDDYHRFHAP TTPSATGSGG  60
IGSGGVGGDI DEGLVIRTQL KRKATREENN AAESSDCMIV TTGVTGNPLL TPVSGKAVKN  120
SKSKTKNNKA GPQTPTPNVG SPLNPSTPAG TCRYDSSLGL LTKKFINLLK QAEDGILDLN  180
NAAETLEVQK RRIYDITNVL EGIGLIEKTL KNRIRWKGLD DSGVELDNGL SGLQEQALDE  240
RISDMREKLR GLTEDENSQR WLYVTEDDIK GLPCFQNETL IAIKAPHGTT LEVPDPDEAG  300
DYLQRRYRIV LRSTLGPIDV YLVSQFDDGF ENLGGAATPP RHTNVPKPGP CEDLHATNAT  360
QSSKSINVEY NIQHRQNTPQ DPSSSNDYGG MTRIIPSDVN TDADYWLLTE GDVSITDMWE  420
TAPEVQWDTA VFLPEDVSIP HAHHSPRMQV PSMDQP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-113	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG029230.8