PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG029230.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 336aa    MW: 36606.4 Da    PI: 5.2899
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG029230.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP86.42.1e-27140205171
           E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                       r+++sL+llt+kf++ll+++e+gi++ln++a++L   +v  ++RRiYDi+NVLe+++liek+ kn+irwkg
  TRIDC6AG029230.5 140 RYDSSLGLLTKKFINLLKQAEDGILDLNNAAETL---EV--QKRRIYDITNVLEGIGLIEKTLKNRIRWKG 205
                       6899******************************...99..****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
PPAAQKILQS LRPPPVFSTP SRPPFASPDD YHRFHAPTTP SATGSGGIGS GGVGGDIDEG  60
LVIRTQLKRK ATREENNAAE SSDCMIVTTG VTGNPLLTPV SGKAVKNSKS KTKNNKAGPQ  120
TPTPNVGSPL NPSTPAGTCR YDSSLGLLTK KFINLLKQAE DGILDLNNAA ETLEVQKRRI  180
YDITNVLEGI GLIEKTLKNR IRWKGLDDSG VELDNGLSGL QTEVENLNLQ EQALDERISD  240
MREKLRGLTE DENSQRWLYV TEDDIKGLPC FQNETLIAIK APHGTTLEVP DPDEVGLVKL  300
VEICTHKWFC GLINDFLCIC SLYRLVIISR GDTESY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22220.35e-86E2F/DP family protein