PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG029230.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

E2F/DP

Protein Properties

Length: 425aa MW: 46423.6 Da PI: 4.7903

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG029230.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	85.9	3e-27	123	188	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++ll+++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liek+ kn+irwkg TRIDC6AG029230.4 123 RYDSSLGLLTKKFINLLKQAEDGILDLNNAAETL---EV--QKRRIYDITNVLEGIGLIEKTLKNRIRWKG 188 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
STPSRPPFAS PDDYHRFHAP TTPSATGSGG IGSGGVGGDI DEGLVIRTQL KRKATREENN 60 AAESSDCMIV TTGVTGNPLL TPVSGKAVKN SKSKTKNNKA GPQTPTPNVG SPLNPSTPAG 120 TCRYDSSLGL LTKKFINLLK QAEDGILDLN NAAETLEVQK RRIYDITNVL EGIGLIEKTL 180 KNRIRWKGLD DSGVELDNGL SGLQEQALDE RISDMREKLR GLTEDENSQR WLYVTEDDIK 240 GLPCFQNETL IAIKAPHGTT LEVPDPDEAG DYLQRRYRIV LRSTLGPIDV YLVSQFDDGF 300 ENLGGAATPP RHTNVPKPGP CEDLHATNAT QSSKSINVEY NIQHRQNTPQ DPSSSNDYGG 360 MTRIIPSDVN TDADYWLLTE GDVSITDMWE TAQVQWDTAV FLPEDVSIPH AHHSPRMQVP 420 SMDQP

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

STPSRPPFAS PDDYHRFHAP TTPSATGSGG IGSGGVGGDI DEGLVIRTQL KRKATREENN  60
AAESSDCMIV TTGVTGNPLL TPVSGKAVKN SKSKTKNNKA GPQTPTPNVG SPLNPSTPAG  120
TCRYDSSLGL LTKKFINLLK QAEDGILDLN NAAETLEVQK RRIYDITNVL EGIGLIEKTL  180
KNRIRWKGLD DSGVELDNGL SGLQEQALDE RISDMREKLR GLTEDENSQR WLYVTEDDIK  240
GLPCFQNETL IAIKAPHGTT LEVPDPDEAG DYLQRRYRIV LRSTLGPIDV YLVSQFDDGF  300
ENLGGAATPP RHTNVPKPGP CEDLHATNAT QSSKSINVEY NIQHRQNTPQ DPSSSNDYGG  360
MTRIIPSDVN TDADYWLLTE GDVSITDMWE TAQVQWDTAV FLPEDVSIPH AHHSPRMQVP  420
SMDQP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-115	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG029230.4