PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG029230.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

E2F/DP

Protein Properties

Length: 454aa MW: 49617.3 Da PI: 4.8201

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG029230.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	85.8	3.3e-27	142	207	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++ll+++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liek+ kn+irwkg TRIDC6AG029230.3 142 RYDSSLGLLTKKFINLLKQAEDGILDLNNAAETL---EV--QKRRIYDITNVLEGIGLIEKTLKNRIRWKG 207 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence
GRPPAAQKIL QSLRPPPVFS TPSRPPFASP DDYHRFHAPT TPSATGSGGI GSGGVGGDID 60 EGLVIRTQLK RKATREENNA AESSDCMIVT TGVTGNPLLT PVSGKAVKNS KSKTKNNKAG 120 PQTPTPNVGS PLNPSTPAGT CRYDSSLGLL TKKFINLLKQ AEDGILDLNN AAETLEVQKR 180 RIYDITNVLE GIGLIEKTLK NRIRWKGLDD SGVELDNGLS GLQTEVENLN LQEQALDERI 240 SDMREKLRGL TEDENSQRWL YVTEDDIKGL PCFQNETLIA IKAPHGTTLE VPDPDEAGDY 300 LQRRYRIVLR STLGPIDVYL VSQFDDGFEN LGGAATPPRH TNVPKPGPCE DLHATNATQS 360 SKSINVEYNI QHRQNTPQDP SSSNDYGGMT RIIPSDVNTD ADYWLLTEGD VSITDMWETA 420 PEVQWDTAVF LPEDVSIPHA HHSPRMQVPS MDQP

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence

GRPPAAQKIL QSLRPPPVFS TPSRPPFASP DDYHRFHAPT TPSATGSGGI GSGGVGGDID  60
EGLVIRTQLK RKATREENNA AESSDCMIVT TGVTGNPLLT PVSGKAVKNS KSKTKNNKAG  120
PQTPTPNVGS PLNPSTPAGT CRYDSSLGLL TKKFINLLKQ AEDGILDLNN AAETLEVQKR  180
RIYDITNVLE GIGLIEKTLK NRIRWKGLDD SGVELDNGLS GLQTEVENLN LQEQALDERI  240
SDMREKLRGL TEDENSQRWL YVTEDDIKGL PCFQNETLIA IKAPHGTTLE VPDPDEAGDY  300
LQRRYRIVLR STLGPIDVYL VSQFDDGFEN LGGAATPPRH TNVPKPGPCE DLHATNATQS  360
SKSINVEYNI QHRQNTPQDP SSSNDYGGMT RIIPSDVNTD ADYWLLTEGD VSITDMWETA  420
PEVQWDTAVF LPEDVSIPHA HHSPRMQVPS MDQP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-120	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG029230.3