PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG029230.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

E2F/DP

Protein Properties

Length: 438aa MW: 47905.3 Da PI: 4.7002

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG029230.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	85.9	3.1e-27	127	192	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++ll+++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liek+ kn+irwkg TRIDC6AG029230.2 127 RYDSSLGLLTKKFINLLKQAEDGILDLNNAAETL---EV--QKRRIYDITNVLEGIGLIEKTLKNRIRWKG 192 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
PPVFSTPSRP PFASPDDYHR FHAPTTPSAT GSGGIGSGGV GGDIDEGLVI RTQLKRKATR 60 EENNAAESSD CMIVTTGVTG NPLLTPVSGK AVKNSKSKTK NNKAGPQTPT PNVGSPLNPS 120 TPAGTCRYDS SLGLLTKKFI NLLKQAEDGI LDLNNAAETL EVQKRRIYDI TNVLEGIGLI 180 EKTLKNRIRW KGLDDSGVEL DNGLSGLQTE VENLNLQEQA LDERISDMRE KLRGLTEDEN 240 SQRWLYVTED DIKGLPCFQN ETLIAIKAPH GTTLEVPDPD EAGDYLQRRY RIVLRSTLGP 300 IDVYLVSQFD DGFENLGGAA TPPRHTNVPK PGPCEDLHAT NATQSSKSIN VEYNIQHRQN 360 TPQDPSSSND YGGMTRIIPS DVNTDADYWL LTEGDVSITD MWETAQVQWD TAVFLPEDVS 420 IPHAHHSPRM QVPSMDQP

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

PPVFSTPSRP PFASPDDYHR FHAPTTPSAT GSGGIGSGGV GGDIDEGLVI RTQLKRKATR  60
EENNAAESSD CMIVTTGVTG NPLLTPVSGK AVKNSKSKTK NNKAGPQTPT PNVGSPLNPS  120
TPAGTCRYDS SLGLLTKKFI NLLKQAEDGI LDLNNAAETL EVQKRRIYDI TNVLEGIGLI  180
EKTLKNRIRW KGLDDSGVEL DNGLSGLQTE VENLNLQEQA LDERISDMRE KLRGLTEDEN  240
SQRWLYVTED DIKGLPCFQN ETLIAIKAPH GTTLEVPDPD EAGDYLQRRY RIVLRSTLGP  300
IDVYLVSQFD DGFENLGGAA TPPRHTNVPK PGPCEDLHAT NATQSSKSIN VEYNIQHRQN  360
TPQDPSSSND YGGMTRIIPS DVNTDADYWL LTEGDVSITD MWETAQVQWD TAVFLPEDVS  420
IPHAHHSPRM QVPSMDQP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-122	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG029230.2