PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG029230.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | E2F/DP | ||||||||
Protein Properties | Length: 256aa MW: 27839.3 Da PI: 5.4724 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 87.1 | 1.3e-27 | 108 | 173 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++ll+++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liek+ kn+irwkg TRIDC6AG029230.1 108 RYDSSLGLLTKKFINLLKQAEDGILDLNNAAETL---EV--QKRRIYDITNVLEGIGLIEKTLKNRIRWKG 173 6899******************************...99..****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
RFHAPTTPSA TGSGGIGSGG VGGDIDEGLV IRTQLKRKAT REENNAAESS DCMIVTTGVT 60 GNPLLTPVSG KAVKNSKSKT KNNKAGPQTP TPNVGSPLNP STPAGTCRYD SSLGLLTKKF 120 INLLKQAEDG ILDLNNAAET LEVQKRRIYD ITNVLEGIGL IEKTLKNRIR WKGLDDSGVE 180 LDNGLSGLQT EVENLNLQEQ ALDERISDMR EKLRGLTEDE NSQRWLYVTE DDIKGLPCFQ 240 VCYSTYMGEQ CHTMKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22220.3 | 4e-68 | E2F/DP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG029230.1 |