PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG025380.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 220aa    MW: 23898.8 Da    PI: 5.8918
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG025380.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2483e-1578123452
               AP2   4 kGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 
                        GVr+++ +g+++AeIrd +    +  r++lg+f+t+e Aa  +++a+  
  TRIDC6AG025380.1  78 IGVRRRP-WGKYAAEIRDSTR---SgERVWLGTFDTPEAAALTYDQAAYT 123
                       6******.**********322...35*********************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
AAADDIALYA QQQHPQYLNF GGGSYQYDGA ASAMGMGMGM DMDQFSALME ATSISTAGPS  60
WAEQQEAKKA KAEPPQLIGV RRRPWGKYAA EIRDSTRSGE RVWLGTFDTP EAAALTYDQA  120
AYTSRGPAAV LNFPVERVRE SLRVLKLGKA AAAGEDDSPV LALKRRHCMR KRTPKGKGQE  180
GDVKKKKQPA ADTASSVLEL EDLGADYLEE LLALSEQWSN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1170187RKRTPKGKGQEGDVKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-43ERF family protein