PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG023860.9 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C3H | ||||||||
Protein Properties | Length: 283aa MW: 29824.8 Da PI: 9.6176 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 23.4 | 1e-07 | 79 | 104 | 2 | 27 |
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 kt+lC+ + Ck Gd+C+FaHg+ TRIDC6AG023860.9 79 KTKLCNKYNTAEGCKWGDKCHFAHGE 104 8***********************96 PP | |||||||
2 | zf-CCCH | 35.8 | 1.4e-11 | 249 | 274 | 1 | 27 |
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 +kt+lC++f + G C +GdrC+FaHg+ TRIDC6AG023860.9 249 FKTKLCDNFTK-GSCTFGDRCHFAHGE 274 69*********.*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence |
CRMSQHREMI IINKHSKCYQ HLTAGCPFGE GCHFLHYFPG GHQAVAKMSN LGGQAFAHPQ 60 GRMPSGSAVP DGHPTPTVKT KLCNKYNTAE GCKWGDKCHF AHGERELGKQ TFINNSMPPH 120 MGPRPTGHFG PPAMPSPGMA TPAGFGASST AKVSVNASLA GAIIGRGGVN TKQISRVTGA 180 KLAIRDHESN EALKNIELEG TFDQINNASA MLRELIFRIS GGANAPPPGV IPAGGSHRGG 240 GGSGQGSNFK TKLCDNFTKG SCTFGDRCHF AHGENELRKS AAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12130.1 | 3e-56 | C3H family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG023860.9 |