PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG023850.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 268aa    MW: 28649.6 Da    PI: 10.8129
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG023850.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH23.59.7e-08104129227
                       -S---SGGGGTS--TTTTT-SS-SSS CS
           zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHgp 27 
                       kt+lC+ +     Ck Gd+C+FaHg+
  TRIDC6AG023850.4 104 KTKLCNKYNTAEGCKWGDKCHFAHGE 129
                       8***********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
RHRALTQYRR LLLWFQLPLH PRHPGRLSGR CRNEHPEWPS SSSKNNSSTG CPFGEGCHFL  60
HYFPGGHQAV AKMSNLGGQA FAQPQGRMPA GSAVPDGQPT PTVKTKLCNK YNTAEGCKWG  120
DKCHFAHGER ELGKHTFINN SMPPRMGTRP IGHFGPPAMP GPAMTTPTGF GASSTAKVSV  180
DASLVGGIIG RGGVNTKQIS GVTGAKLAIR LEDLTAAAAA VSREATSRPS CATTSRKDRA  240
RLATDATLPM ARTSCANRLP REVDLPTH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06770.18e-12C3H family protein