PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG023850.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C3H | ||||||||
Protein Properties | Length: 239aa MW: 24912.4 Da PI: 10.3608 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 23.7 | 8.3e-08 | 75 | 100 | 2 | 27 |
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 kt+lC+ + Ck Gd+C+FaHg+ TRIDC6AG023850.3 75 KTKLCNKYNTAEGCKWGDKCHFAHGE 100 8***********************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
SFQTGVGSKS KPCTKFFSST GCPFGEGCHF LHYFPGGHQA VAKMSNLGGQ AFAQPQGRMP 60 AGSAVPDGQP TPTVKTKLCN KYNTAEGCKW GDKCHFAHGE RELGKHTFIN NSMPPRMGTR 120 PIGHFGPPAM PGPAMTTPTG FGASSTAKVS VDASLVGGII GRGGVNTKQI SGVTGAKLAI 180 RLEDLTAAAA AVSREATSRP SCATTSRKDR ARLATDATLP MARTSCANRL PREVDLPTH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12130.1 | 2e-21 | C3H family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG023850.3 |