PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG022190.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YC
Protein Properties Length: 275aa    MW: 30507.5 Da    PI: 4.9569
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG022190.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC175.65.2e-55972011102
             NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifd 90 
                       ql+ fw++q   ie+atdfknh+lPlarikki+kadedv+misaeaPv+++kace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdi+d
  TRIDC6AG022190.2  97 QLREFWATQmeeIEQATDFKNHTLPLARIKKIMKADEDVRMISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYD 189
                       89*****996677899***************************************************************************** PP

             NF-YC  91 flvdivprdelk 102
                       flvdi+prd++k
  TRIDC6AG022190.2 190 FLVDIIPRDDMK 201
                       *********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
LIVLRSAQEV FGFARTRSHM EPSSQPEPVV GVATAGSQAY PPPAAYPAPA MPAAIPPGSQ  60
PAVPFPANPA QLSAQHQLVY QQAQQFHQQL QQQQQQQLRE FWATQMEEIE QATDFKNHTL  120
PLARIKKIMK ADEDVRMISA EAPVVFAKAC EVFILELTLR SWMHTEENKR RTLQKNDIAA  180
AITRTDIYDF LVDIIPRDDM KEEGLGLPRV GLPPAALGAP ADAYPPYYYV QAQQVPGVGM  240
MYGGQQGHPV AYAWQQPQGQ QAEEAPEEQQ QSPSN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1170176RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.14e-64NF-YC family protein