PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG021720.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 264aa MW: 29137.9 Da PI: 9.4857

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG021720.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	117.9	5e-37	1	73	6	78
T-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 6 gCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 gC ++l +akeyhr+h+vCe+h+k p v+v+g+e+rfCqqCsrfh+lsefD++krsCrrrL++hn+rrrk+q+ TRIDC6AG021720.2 1 GCGVELRDAKEYHRKHRVCEAHTKFPRVVVAGQERRFCQQCSRFHALSEFDQKKRSCRRRLSDHNARRRKPQP 73 6*********************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
GCGVELRDAK EYHRKHRVCE AHTKFPRVVV AGQERRFCQQ CSRFHALSEF DQKKRSCRRR 60 LSDHNARRRK PQPDAFSFTP ARLPSSLVFD DRRQISFVWN KDPLSHARPF PCSPWDSPSD 120 FKLPQVKEIR EVSINGQVHF DKSHLPNAVP ALSHDIAELL PMKGPDASVT ASKLGGAPDL 180 QRALSLLSAS SCGLPDPVQQ ASCLVQFTGA SQNSRGPSPH GGSPPSASCA EGQPMAPSPQ 240 FVRFTMDGAS SGYESTFFGV NRMN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	53	70	KKRSCRRRLSDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	5e-42	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG021720.2