PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG021690.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 369aa MW: 38222.7 Da PI: 4.1973

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG021690.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	28.1	5.4e-09	78	157	1	71
trihelix 1 rWtkqevlaLiearremeerlr.rgklkkplWeevskkm........rergferspkqCkekwenlnkrykkikegekkr 71 +Wt e+laL++a+ ++++ r+ ++ ++W+ v++++ +r r + +Ck +we l +y +++++e++ TRIDC6AG021690.2 78 EWTAAETLALVAAVAAVDDDGWaRSVSAFQKWAIVAENIafsdaggaPSRRRGRAAGECKRRWEALVAEYGAVRRWEGRT 157 5************99988772577999**********99996666679*********************983 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MDPPGGDFPC IVQALPSVDP NEAASDSPCI VQALAASPSP SPSKALALTP AARDQPPPAF 60 KSSRPPSPRR TRSGRAPEWT AAETLALVAA VAAVDDDGWA RSVSAFQKWA IVAENIAFSD 120 AGGAPSRRRG RAAGECKRRW EALVAEYGAV RRWEGRTGGS YWRMSAAARR KAGLPAEFDA 180 EVYGIMDALI RVDEALLGGA GGGGGDEGLV SANGGGGGGG GGGDTAGVGE EEGGDAGVEK 240 EEDSAAEEAD DDGSEEEMQV DGGNANASDD LGCEMETHNE PKKSQADAWE LANRLNENAQ 300 HIHMILSGEA DEDGGHHNAP AYAVSPDAME TTRQKADELI KSLGGLVSYL NQFTDLIKEN 360 GIEDVVGVN

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MDPPGGDFPC IVQALPSVDP NEAASDSPCI VQALAASPSP SPSKALALTP AARDQPPPAF  60
KSSRPPSPRR TRSGRAPEWT AAETLALVAA VAAVDDDGWA RSVSAFQKWA IVAENIAFSD  120
AGGAPSRRRG RAAGECKRRW EALVAEYGAV RRWEGRTGGS YWRMSAAARR KAGLPAEFDA  180
EVYGIMDALI RVDEALLGGA GGGGGDEGLV SANGGGGGGG GGGDTAGVGE EEGGDAGVEK  240
EEDSAAEEAD DDGSEEEMQV DGGNANASDD LGCEMETHNE PKKSQADAWE LANRLNENAQ  300
HIHMILSGEA DEDGGHHNAP AYAVSPDAME TTRQKADELI KSLGGLVSYL NQFTDLIKEN  360
GIEDVVGVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	1e-13	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG021690.2