PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG020190.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 278aa MW: 29992.4 Da PI: 9.1557 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.5 | 1.8e-30 | 120 | 179 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ k++++pr+Y+rC++a gCpvkkkv+rsaed+++++ tYegeHnh+ TRIDC6AG020190.2 120 VKDGYQWRKYGQKVTKDNPCPRAYFRCSFApGCPVKKKVQRSAEDKTILVATYEGEHNHT 179 58***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence |
MLREVASKYE ALQGQFTDMV TAGAHAGGNN SHYNNQPSSA SEGGSVSPSR KRKSEESLGT 60 PPRPSQHQQQ HYAGGLAYAA APDQAECTSG EPCKRIREEC KPVVSKRYVH ADPSDLSLVV 120 KDGYQWRKYG QKVTKDNPCP RAYFRCSFAP GCPVKKKVQR SAEDKTILVA TYEGEHNHTQ 180 PPPSQPQQQN DGSGAGKNAG KPPQAPTATP HHPQQQHKQE AAAAAVSGES AVAASELIRR 240 NLAEQMAMTL TRDPSFKAAL VSALSGRILE LSPTRDIN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 49 | 54 | SRKRKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80840.1 | 1e-45 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG020190.2 |