PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG020030.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARR-B

Protein Properties

Length: 568aa MW: 61337.9 Da PI: 7.0464

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG020030.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.7	5.3e-28	163	216	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ +t+e+v+SHLQkYRl TRIDC6AG020030.6 163 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDLMNVENITRENVASHLQKYRL 216 79*****************.******************************8 PP
2	Myb_DNA-binding	36.7	1e-11	165	215	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I m+ ++ t++++ s++qky+ TRIDC6AG020030.6 165 RVVWSVELHRKFVAAVNQLGIDkaVPKKILDLMNvENITRENVASHLQKYR 215 678***********************************************7 PP
3	Response_reg	59.6	1.7e-20	8	93	25	109
EEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 25 evaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 +v+++ ++ al++l+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++a+ge +++ + + Ga d+l Kp+ e+l + TRIDC6AG020030.6 8 VVTTTGQAATALRMLRENKdqFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKT 93 6899999******888888***************87754.558*********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
CGPPLLLVVT TTGQAATALR MLRENKDQFD LVISDVHMPD MDGFKLLELV GLEMDLPVIM 60 LSANGETQTV MKGITHGACD YLLKPVRLEQ LKTIWQHVIR RNTKNRGSDN DDAGQKGPNA 120 EGENGGANRN KRQSRRDRDD NGDDGDDSDE NSNDNGDSSS QKKPRVVWSV ELHRKFVAAV 180 NQLGIDKAVP KKILDLMNVE NITRENVASH LQKYRLYLKR MSMDASRQAN LVAALGGRNP 240 AYSNMNSMDV FRHYNNAYGR YRPVPTSSHS QSNNLVARMN SPSAYGMHGL LSPQSQPLHL 300 GHAQNNLGTS LNDLGVNNGN LIRGAHMSTM GTGTSGNSFA NISNGAPLAT TNRAVQSLES 360 NNRQHLGRIN SSSTDSFSSF ASDSPHFPDL GRSSNTWQTA VPSNIQQLGQ NGSMSQASLH 420 GNGPRMEPVS SYTPPSNQIT SLGNDMQNQV APLASNTLPM VFNQGAAPFT FGNSTNSREA 480 LNSNLAFSNS GINTSLPNLC IDNSVVPRQT LDGGNTGGVP SLQDGKIDQQ AVGNQLNYNN 540 NDLVGTSGLQ RELSGGLDDI VVDMFRPG

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

CGPPLLLVVT TTGQAATALR MLRENKDQFD LVISDVHMPD MDGFKLLELV GLEMDLPVIM  60
LSANGETQTV MKGITHGACD YLLKPVRLEQ LKTIWQHVIR RNTKNRGSDN DDAGQKGPNA  120
EGENGGANRN KRQSRRDRDD NGDDGDDSDE NSNDNGDSSS QKKPRVVWSV ELHRKFVAAV  180
NQLGIDKAVP KKILDLMNVE NITRENVASH LQKYRLYLKR MSMDASRQAN LVAALGGRNP  240
AYSNMNSMDV FRHYNNAYGR YRPVPTSSHS QSNNLVARMN SPSAYGMHGL LSPQSQPLHL  300
GHAQNNLGTS LNDLGVNNGN LIRGAHMSTM GTGTSGNSFA NISNGAPLAT TNRAVQSLES  360
NNRQHLGRIN SSSTDSFSSF ASDSPHFPDL GRSSNTWQTA VPSNIQQLGQ NGSMSQASLH  420
GNGPRMEPVS SYTPPSNQIT SLGNDMQNQV APLASNTLPM VFNQGAAPFT FGNSTNSREA  480
LNSNLAFSNS GINTSLPNLC IDNSVVPRQT LDGGNTGGVP SLQDGKIDQQ AVGNQLNYNN  540
NDLVGTSGLQ RELSGGLDDI VVDMFRPG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	1e-85	ARR-B family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG020030.6