PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG020030.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ARR-B | ||||||||
Protein Properties | Length: 614aa MW: 66442.8 Da PI: 7.7121 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 88.6 | 5.9e-28 | 209 | 262 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ +t+e+v+SHLQkYRl TRIDC6AG020030.2 209 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDLMNVENITRENVASHLQKYRL 262 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 36.5 | 1.1e-11 | 211 | 261 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I m+ ++ t++++ s++qky+ TRIDC6AG020030.2 211 RVVWSVELHRKFVAAVNQLGIDkaVPKKILDLMNvENITRENVASHLQKYR 261 678***********************************************7 PP | |||||||
3 | Response_reg | 79.8 | 9e-27 | 31 | 139 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 vl vdD+p+ +++l+++l++ +y +v+++ ++ al++l+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++a+ge +++ + + TRIDC6AG020030.2 31 VLAVDDDPTCLKVLENLLRRCDY-HVTTTGQAATALRMLRENKdqFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGETQTVMKGIT 121 799********************.***************888889*******************87754.558******************** PP TTESEEEESS--HHHHHH CS Response_reg 92 aGakdflsKpfdpeelvk 109 Ga d+l Kp+ e+l + TRIDC6AG020030.2 122 HGACDYLLKPVRLEQLKT 139 ***************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 614 aa Download sequence |
VPCGTRGGRK MTVEGRVGGG GKDKFPVGMR VLAVDDDPTC LKVLENLLRR CDYHVTTTGQ 60 AATALRMLRE NKDQFDLVIS DVHMPDMDGF KLLELVGLEM DLPVIMLSAN GETQTVMKGI 120 THGACDYLLK PVRLEQLKTI WQHVIRRNTK NRGSDNDDAG QKGPNAEGEN GGANRNKRQS 180 RRDRDDNGDD GDDSDENSND NGDSSSQKKP RVVWSVELHR KFVAAVNQLG IDKAVPKKIL 240 DLMNVENITR ENVASHLQKY RLYLKRMSMD ASRQANLVAA LGGRNPAYSN MNSMDVFRHY 300 NNAYGRYRPV PTSSHSQSNN LVARMNSPSA YGMHGLLSPQ SQPLHLGHAQ NNLGTSLNDL 360 GVNNGNLIRG AHMSTMGTGT SGNSFANISN GAPLATTNRA VQSLESNNRQ HLGRINSSST 420 DSFSSFASDS PHFPDLGRSS NTWQTAVPSN IQQLGQNGSM SQASLHGNGP RMEPVSSYTP 480 PSNQITSLGN DMQNQVAPLA SNTLPMVFNQ GAAPFTFGNS TNSREALNSN LAFSNSGINT 540 SLPNLCIDNS VVPRQTLDGG NTGGVPSLQD GKIDQQAVGN QLNYNNNDLV GTSGLQRELS 600 GGLDDIVVDM FRPV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-107 | ARR-B family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG020030.2 |