PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG020030.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARR-B
Protein Properties Length: 619aa    MW: 67064.3 Da    PI: 6.5692
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG020030.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like88.65.9e-28199252155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       kpr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ +t+e+v+SHLQkYRl
  TRIDC6AG020030.1 199 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDLMNVENITRENVASHLQKYRL 252
                       79*******************.********************************8 PP
2Myb_DNA-binding36.51.1e-11201251148
                       TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       r  W+ e++ ++v av+qlG +   +k+I   m+ ++ t++++ s++qky+
  TRIDC6AG020030.1 201 RVVWSVELHRKFVAAVNQLGIDkaVPKKILDLMNvENITRENVASHLQKYR 251
                       678***********************************************7 PP
3Response_reg79.89.1e-27211291109
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       vl vdD+p+ +++l+++l++ +y +v+++ ++  al++l+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++a+ge +++ + + 
  TRIDC6AG020030.1  21 VLAVDDDPTCLKVLENLLRRCDY-HVTTTGQAATALRMLRENKdqFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGETQTVMKGIT 111
                       799********************.***************888889*******************87754.558******************** PP

                       TTESEEEESS--HHHHHH CS
      Response_reg  92 aGakdflsKpfdpeelvk 109
                        Ga d+l Kp+  e+l +
  TRIDC6AG020030.1 112 HGACDYLLKPVRLEQLKT 129
                       ***************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 619 aa     Download sequence    
MTVEGRVGGG GKDKFPVGMR VLAVDDDPTC LKVLENLLRR CDYHVTTTGQ AATALRMLRE  60
NKDQFDLVIS DVHMPDMDGF KLLELVGLEM DLPVIMLSAN GETQTVMKGI THGACDYLLK  120
PVRLEQLKTI WQHVIRRNTK NRGSDNDDAG QKGPNAEGEN GGANRNKRQS RRDRDDNGDD  180
GDDSDENSND NGDSSSQKKP RVVWSVELHR KFVAAVNQLG IDKAVPKKIL DLMNVENITR  240
ENVASHLQKY RLYLKRMSMD ASRQANLVAA LGGRNPAYSN MNSMDVFRHY NNAYGRYRPV  300
PTSSHSQSNN LVARMNSPSA YGMHGLLSPQ SQPLHLGHAQ NNLGTSLNDL GVNNGNLIRG  360
AHMSTMGTGT SGNSFANISN GAPLATTNRA VQSLESNNRQ HLGRINSSST DSFSSFASDS  420
PHFPDLGRSS NTWQTAVPSN IQQLGQNGSM SQASLHGNGP RMEPVSSYTP PSNQITSLGN  480
DMQNQVAPLA SNTLPMVFNQ GAAPFTFGNS TNSREALNSN LAFSNSGINT SLPNLCIDNS  540
VVPRQTLDGG NTGGVPSLQD GKIDQQAVGN QLNYNNNDLV GTSGLQRELS GGLDDIVVDM  600
FRPDNDNGGI FIDTDWGLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-107ARR-B family protein