PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG018730.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 775aa    MW: 86123.5 Da    PI: 6.6331
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG018730.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3758.6e-24135236199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae+        ++++++  +l+ +d++g++W++++i+r++++r++lt+GW+ F +a++L +gD+v+F   +
  TRIDC6AG018730.9 135 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftQQPPAQ--ELVAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFISAKRLVAGDSVLFI--W 223
                       99*****************************86555544..8************************************************..7 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++ +l+++++r+
  TRIDC6AG018730.9 224 NDNNQLLLGIRRA 236
                       777778***9997 PP
2Auxin_resp1219.3e-40261344183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaast+s F+++YnPras+seFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdldp rWpnS+Wrs+k
  TRIDC6AG018730.9 261 AAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDPARWPNSHWRSVK 344
                       79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 775 aa     Download sequence    
CRMQEPFSEL GMRLKRFSFS ASEEHRCLNS ELWHACAGPL VSLPAVGSRV LYFPQGHSEQ  60
VSASTNKEME SQIPNYPNLP PQLICQLHNV TMHADAETDE VYAQMTLQPL SPQELKDPFL  120
PAELGNASKQ PTNYFCKTLT ASDTSTHGGF SVPRRAAEKV FPPLDFTQQP PAQELVAKDL  180
HGNEWKFRHI FRGQPKRHLL TTGWSVFISA KRLVAGDSVL FIWNDNNQLL LGIRRANRSQ  240
TVMPSSVLSS DSMHIGLLAA AAHAASTNSR FTIFYNPRAS PSEFVIPLAK YVKAVYHTRI  300
SVGMRFRMLF ETEESSVRRY MGTITGISDL DPARWPNSHW RSVKVGWDES TAGERQPRVS  360
LWEIEPLTTY PMYSSPFPMR LKRPWPTGLP SLYGTGGKED DLTSSLMWLR DGANPGFQSF  420
SFGGLGMSPW MQPMMDSSLL GLQPDMYQAM SAAAFQNTTK QVSPTLLQFQ QPQNIAGRSA  480
LLSSQILQQV QPQFQEMHHQ NINDSAIQGH NQSEYLQQQL QRCQSFNGQK SPPPQQQESH  540
HQHQQQQSQC MQTPQHQQMQ EQKHSPDFQC VPNGLSVFSQ LSSTNQSPPS TLQTVSAFSQ  600
QQNLQDRNIS SLSPSNVPSM HDTLRPFPSE AGSNLQGVPR TTPVPVSDPW SSKRVAMESV  660
IPSSSHVNSP HIQHLDSAPS NIPQSSSLAP LPGRECLVDQ DGNSDNQNHL LFGVNIDSQS  720
LLMQGGIPSL QEDNGCIASL QDDNDSSTIP YSTCNFLSPS QNDFPLNEAL ASSGC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein