PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG018730.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 912aa    MW: 101105 Da    PI: 6.1435
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG018730.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.71.1e-23121222199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae+        ++++++  +l+ +d++g++W++++i+r++++r++lt+GW+ F +a++L +gD+v+F   +
  TRIDC6AG018730.7 121 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftQQPPAQ--ELVAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFISAKRLVAGDSVLFI--W 209
                       99*****************************86555544..8************************************************..7 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++ +l+++++r+
  TRIDC6AG018730.7 210 NDNNQLLLGIRRA 222
                       777778***9997 PP
2Auxin_resp120.71.2e-39247330183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaast+s F+++YnPras+seFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdldp rWpnS+Wrs+k
  TRIDC6AG018730.7 247 AAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDPARWPNSHWRSVK 330
                       79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 912 aa     Download sequence    
LRFSFSASEE HRCLNSELWH ACAGPLVSLP AVGSRVLYFP QGHSEQVSAS TNKEMESQIP  60
NYPNLPPQLI CQLHNVTMHA DAETDEVYAQ MTLQPLSPQE LKDPFLPAEL GNASKQPTNY  120
FCKTLTASDT STHGGFSVPR RAAEKVFPPL DFTQQPPAQE LVAKDLHGNE WKFRHIFRGQ  180
PKRHLLTTGW SVFISAKRLV AGDSVLFIWN DNNQLLLGIR RANRSQTVMP SSVLSSDSMH  240
IGLLAAAAHA ASTNSRFTIF YNPRASPSEF VIPLAKYVKA VYHTRISVGM RFRMLFETEE  300
SSVRRYMGTI TGISDLDPAR WPNSHWRSVK VGWDESTAGE RQPRVSLWEI EPLTTYPMYS  360
SPFPMRLKRP WPTGLPSLYG GKEDDLTSSL MWLRDGANPG FQSFSFGGLG MSPWMQPMMD  420
SSLLGLQPDM YQAMSAAAFQ NTTKQVSPTL LQFQQPQNIA GRSALLSSQI LQQVQPQFQE  480
MHHQNINDSA IQGHNQSEYL QQQLQRCQSF NGQKSPPPQQ QESHHQHQQQ QSQCMQTPQH  540
QQMQEQKHSP DFQCVPNGLS VFSQLSSTNQ SPPSTLQTVS AFSQQQNLQD RNISSLSPSN  600
VPSMHDTLRP FPSEAGSNLQ GVPRTTPVPV SDPWSSKRVA MESVIPSSSH VNSPHIQHLD  660
SAPSNIPQSS SLAPLPGREC LVDQDGNSDN QNHLLFGVNI DSQSLLMQGG IPSLQEDNGC  720
IASLQDDNDS STIPYSTCNF LSPSQNDFPL NEALASSGCL DESGYASFSE NSDHVNQPTA  780
AFVKVYKSGA FGRLLDITKF SSYHELRSEV GRLFGLDGQL EDPARSGWQL VFVDREDDIL  840
LVGDDPWQEF VNSVSCIKVL TPQEVQQMGK QGIDLLSSAP ARRLGNSCDN YAGRQESRSL  900
STVIASVGSV EF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein