PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG018730.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 824aa    MW: 91256 Da    PI: 6.3298
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG018730.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.99.4e-2431132199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae+        ++++++  +l+ +d++g++W++++i+r++++r++lt+GW+ F +a++L +gD+v+F   +
  TRIDC6AG018730.5  31 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftQQPPAQ--ELVAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFISAKRLVAGDSVLFI--W 119
                       99*****************************86555544..8************************************************..7 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++ +l+++++r+
  TRIDC6AG018730.5 120 NDNNQLLLGIRRA 132
                       777778***9997 PP
2Auxin_resp120.81e-39157240183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaast+s F+++YnPras+seFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdldp rWpnS+Wrs+k
  TRIDC6AG018730.5 157 AAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDPARWPNSHWRSVK 240
                       79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 824 aa     Download sequence    
MTLQPLSPQE LKDPFLPAEL GNASKQPTNY FCKTLTASDT STHGGFSVPR RAAEKVFPPL  60
DFTQQPPAQE LVAKDLHGNE WKFRHIFRGQ PKRHLLTTGW SVFISAKRLV AGDSVLFIWN  120
DNNQLLLGIR RANRSQTVMP SSVLSSDSMH IGLLAAAAHA ASTNSRFTIF YNPRASPSEF  180
VIPLAKYVKA VYHTRISVGM RFRMLFETEE SSVRRYMGTI TGISDLDPAR WPNSHWRSVK  240
VGWDESTAGE RQPRVSLWEI EPLTTYPMYS SPFPMRLKRP WPTGLPSLYG TGGKEDDLTS  300
SLMWLRDGAN PGFQSFSFGG LGMSPWMQPM MDSSLLGLQP DMYQAMSAAA FQNTTKQVSP  360
TLLQFQQPQN IAGRSALLSS QILQQVQPQF QEMHHQNIND SAIQGHNQSE YLQQQLQRCQ  420
SFNGQKSPPP QQQESHHQHQ QQQSQCMQTP QHQQMQEQKH SPDFQCVPNG LSVFSQLSST  480
NQSPPSTLQT VSAFSQQQNL QDRNISSLSP SNVPSMHDTL RPFPSEAGSN LQGVPRTTPV  540
PVSDPWSSKR VAMESVIPSS SHVNSPHIQH LDSAPSNIPQ SSSLAPLPGR ECLVDQDGNS  600
DNQNHLLFGV NIDSQSLLMQ GGIPSLQEDN GCIASLQDDN DSSTIPYSTC NFLSPSQNDF  660
PLNEALASSG CLDESGYASF SENSDHVNQP TAAFVKVYKS GAFGRLLDIT KFSSYHELRS  720
EVGRLFGLDG QLEDPARSGW QLVFVDREDD ILLVGDDPWQ EFVNSVSCIK VLTPQEVQQM  780
GKQGIDLLSS APARRLGNSC DNYAGRQESR SLSTVIASVG SVEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein