PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG018730.20

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 679aa MW: 75494.2 Da PI: 6.39

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG018730.20	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	36.1	1.2e-11	1	51	47	99
EEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 47 evkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++++i+r++++r++lt+GW+ F +a++L +gD+v+F ++++ +l+++++r+ TRIDC6AG018730.20 1 KFRHIFRGQPKRHLLTTGWSVFISAKRLVAGDSVLFI--WNDNNQLLLGIRRA 51 69*********************************..7777778*9997 PP
2	Auxin_resp	121.2	7.7e-40	76	159	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaast+s F+++YnPras+seFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdldp rWpnS+Wrs+k TRIDC6AG018730.20 76 AAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDPARWPNSHWRSVK 159 79*******************************9789****************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 679 aa Download sequence
KFRHIFRGQP KRHLLTTGWS VFISAKRLVA GDSVLFIWND NNQLLLGIRR ANRSQTVMPS 60 SVLSSDSMHI GLLAAAAHAA STNSRFTIFY NPRASPSEFV IPLAKYVKAV YHTRISVGMR 120 FRMLFETEES SVRRYMGTIT GISDLDPARW PNSHWRSVKV GWDESTAGER QPRVSLWEIE 180 PLTTYPMYSS PFPMRLKRPW PTGLPSLYGT GGKEDDLTSS LMWLRDGANP GFQSFSFGGL 240 GMSPWMQPMM DSSLLGLQPD MYQAMSAAAF QNTTKQVSPT LLQFQQPQNI AGRSALLSSQ 300 ILQQVQPQFQ EMHHQNINDS AIQGHNQSEY LQQQLQRCQS FNGQKSPPPQ QQESHHQHQQ 360 QQSQCMQTPQ HQQMQEQKHS PDFQCVPNGL SVFSQLSSTN QSPPSTLQTV SAFSQQQNLQ 420 DRNISSLSPS NVPSMHDTLR PFPSEAGSNL QGVPRTTPVP VSDPWSSKRV AMESVIPSSS 480 HVNSPHIQHL DSAPSNIPQS SSLAPLPGRE CLVDQDGNSD NQNHLLFGVN IDSQSLLMQG 540 GIPSLQEDNG CIASLQDDND SSTIPYSTCN FLSPSQNDFP LNEALASSGC LDESGYASFS 600 ENSDHVNQPT AAFVKVYKSG AFGRLLDITK FSSYHELRSE VGRLFGLDGQ LEDPARSGWQ 660 LVFVDREDDI LLVGDDPWQ

Sequence ? help Back to Top

Protein Sequence Length: 679 aa Download sequence

KFRHIFRGQP KRHLLTTGWS VFISAKRLVA GDSVLFIWND NNQLLLGIRR ANRSQTVMPS  60
SVLSSDSMHI GLLAAAAHAA STNSRFTIFY NPRASPSEFV IPLAKYVKAV YHTRISVGMR  120
FRMLFETEES SVRRYMGTIT GISDLDPARW PNSHWRSVKV GWDESTAGER QPRVSLWEIE  180
PLTTYPMYSS PFPMRLKRPW PTGLPSLYGT GGKEDDLTSS LMWLRDGANP GFQSFSFGGL  240
GMSPWMQPMM DSSLLGLQPD MYQAMSAAAF QNTTKQVSPT LLQFQQPQNI AGRSALLSSQ  300
ILQQVQPQFQ EMHHQNINDS AIQGHNQSEY LQQQLQRCQS FNGQKSPPPQ QQESHHQHQQ  360
QQSQCMQTPQ HQQMQEQKHS PDFQCVPNGL SVFSQLSSTN QSPPSTLQTV SAFSQQQNLQ  420
DRNISSLSPS NVPSMHDTLR PFPSEAGSNL QGVPRTTPVP VSDPWSSKRV AMESVIPSSS  480
HVNSPHIQHL DSAPSNIPQS SSLAPLPGRE CLVDQDGNSD NQNHLLFGVN IDSQSLLMQG  540
GIPSLQEDNG CIASLQDDND SSTIPYSTCN FLSPSQNDFP LNEALASSGC LDESGYASFS  600
ENSDHVNQPT AAFVKVYKSG AFGRLLDITK FSSYHELRSE VGRLFGLDGQ LEDPARSGWQ  660
LVFVDREDDI LLVGDDPWQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30330.2	1e-151	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG018730.20