PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG018730.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 926aa    MW: 102245 Da    PI: 5.9342
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG018730.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.71.1e-23135236199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae+        ++++++  +l+ +d++g++W++++i+r++++r++lt+GW+ F +a++L +gD+v+F   +
  TRIDC6AG018730.2 135 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftQQPPAQ--ELVAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFISAKRLVAGDSVLFI--W 223
                       99*****************************86555544..8************************************************..7 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++ +l+++++r+
  TRIDC6AG018730.2 224 NDNNQLLLGIRRA 236
                       777778**99997 PP
2Auxin_resp120.61.2e-39261344183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaast+s F+++YnPras+seFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdldp rWpnS+Wrs+k
  TRIDC6AG018730.2 261 AAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDPARWPNSHWRSVK 344
                       79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 926 aa     Download sequence    
MNLSPSAAGG GLPDQPASPE ASEEHRCLNS ELWHACAGPL VSLPAVGSRV LYFPQGHSEQ  60
VSASTNKEME SQIPNYPNLP PQLICQLHNV TMHADAETDE VYAQMTLQPL SPQELKDPFL  120
PAELGNASKQ PTNYFCKTLT ASDTSTHGGF SVPRRAAEKV FPPLDFTQQP PAQELVAKDL  180
HGNEWKFRHI FRGQPKRHLL TTGWSVFISA KRLVAGDSVL FIWNDNNQLL LGIRRANRSQ  240
TVMPSSVLSS DSMHIGLLAA AAHAASTNSR FTIFYNPRAS PSEFVIPLAK YVKAVYHTRI  300
SVGMRFRMLF ETEESSVRRY MGTITGISDL DPARWPNSHW RSVKVGWDES TAGERQPRVS  360
LWEIEPLTTY PMYSSPFPMR LKRPWPTGLP SLYGGKEDDL TSSLMWLRDG ANPGFQSFSF  420
GGLGMSPWMQ PMMDSSLLGL QPDMYQAMSA AAFQNTTKQV SPTLLQFQQP QNIAGRSALL  480
SSQILQQVQP QFQEMHHQNI NDSAIQGHNQ SEYLQQQLQR CQSFNGQKSP PPQQQESHHQ  540
HQQQQSQCMQ TPQHQQMQEQ KHSPDFQCVP NGLSVFSQLS STNQSPPSTL QTVSAFSQQQ  600
NLQDRNISSL SPSNVPSMHD TLRPFPSEAG SNLQGVPRTT PVPVSDPWSS KRVAMESVIP  660
SSSHVNSPHI QHLDSAPSNI PQSSSLAPLP GRECLVDQDG NSDNQNHLLF GVNIDSQSLL  720
MQGGIPSLQE DNGCIASLQD DNDSSTIPYS TCNFLSPSQN DFPLNEALAS SGCLDESGYA  780
SFSENSDHVN QPTAAFVKVY KSGAFGRLLD ITKFSSYHEL RSEVGRLFGL DGQLEDPARS  840
GWQLVFVDRE DDILLVGDDP WQEFVNSVSC IKVLTPQEVQ QMGKQGIDLL SSAPARRLGN  900
SCDNYAGRQE SRSLSTVIAS VGSVEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein