PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG018730.15
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 597aa    MW: 67649.7 Da    PI: 8.997
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG018730.15genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.65.8e-24130231199
                        EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                        f+k+lt sd++++g +++p++ ae+        ++++++  +l+ +d++g++W++++i+r++++r++lt+GW+ F +a++L +gD+v+F   
  TRIDC6AG018730.15 130 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftQQPPAQ--ELVAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFISAKRLVAGDSVLFI-- 217
                        99*****************************86555544..8************************************************.. PP

                        SSSEE..EEEEE-S CS
                 B3  86 grsefelvvkvfrk 99 
                        ++++ +l+++++r+
  TRIDC6AG018730.15 218 WNDNNQLLLGIRRA 231
                        7777778***9997 PP
2Auxin_resp121.56.4e-40256339183
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                        aahaast+s F+++YnPras+seFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdldp rWpnS+Wrs+k
  TRIDC6AG018730.15 256 AAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDPARWPNSHWRSVK 339
                        79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 597 aa     Download sequence    
FNYLLRLLLR RFSFSASEEH RCLNSELWHA CAGPLVSLPA VGSRVLYFPQ GHSEQVSAST  60
NKEMESQIPN YPNLPPQLIC QLHNVTMHAD AETDEVYAQM TLQPLSPQEL KDPFLPAELG  120
NASKQPTNYF CKTLTASDTS THGGFSVPRR AAEKVFPPLD FTQQPPAQEL VAKDLHGNEW  180
KFRHIFRGQP KRHLLTTGWS VFISAKRLVA GDSVLFIWND NNQLLLGIRR ANRSQTVMPS  240
SVLSSDSMHI GLLAAAAHAA STNSRFTIFY NPRASPSEFV IPLAKYVKAV YHTRISVGMR  300
FRMLFETEES SVRRYMGTIT GISDLDPARW PNSHWRSVKV GWDESTAGER QPRVSLWEIE  360
PLTTYPMYSS PFPMRLKRPW PTGLPSLYGT GGKEDDLTSS LMWLRDGANP GFQSFSFGGL  420
GMSPWMQPMM DSSLLGLQPD MYQAMSAAAF QNTTKQVSPT LLQFQQPQNI AGRSALLSSQ  480
ILQQVQPQFQ EMHHQNINDS AIQGHNQSEY LQQQLQRCQS FNGQKSPPPQ QQESHHQHQQ  540
QQSQCMQTPQ HQQIFPPPIS LHLPHCRQFQ RSHSSRTFKT EISALFLHRM SRPCMTH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein