PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG018730.14 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ARF | ||||||||
Protein Properties | Length: 858aa MW: 95191.4 Da PI: 6.0594 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 74.8 | 9.9e-24 | 67 | 168 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 f+k+lt sd++++g +++p++ ae+ ++++++ +l+ +d++g++W++++i+r++++r++lt+GW+ F +a++L +gD+v+F TRIDC6AG018730.14 67 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftQQPPAQ--ELVAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFISAKRLVAGDSVLFI-- 154 99*****************************86555544..8************************************************.. PP SSSEE..EEEEE-S CS B3 86 grsefelvvkvfrk 99 ++++ +l+++++r+ TRIDC6AG018730.14 155 WNDNNQLLLGIRRA 168 7777778***9997 PP | |||||||
2 | Auxin_resp | 120.8 | 1.1e-39 | 193 | 276 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaast+s F+++YnPras+seFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdldp rWpnS+Wrs+k TRIDC6AG018730.14 193 AAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDPARWPNSHWRSVK 276 79*********************************9789******************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 858 aa Download sequence |
MESQIPNYPN LPPQLICQLH NVTMHADAET DEVYAQMTLQ PLSPQELKDP FLPAELGNAS 60 KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFTQ QPPAQELVAK DLHGNEWKFR 120 HIFRGQPKRH LLTTGWSVFI SAKRLVAGDS VLFIWNDNNQ LLLGIRRANR SQTVMPSSVL 180 SSDSMHIGLL AAAAHAASTN SRFTIFYNPR ASPSEFVIPL AKYVKAVYHT RISVGMRFRM 240 LFETEESSVR RYMGTITGIS DLDPARWPNS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT 300 TYPMYSSPFP MRLKRPWPTG LPSLYGGKED DLTSSLMWLR DGANPGFQSF SFGGLGMSPW 360 MQPMMDSSLL GLQPDMYQAM SAAAFQNTTK QVSPTLLQFQ QPQNIAGRSA LLSSQILQQV 420 QPQFQEMHHQ NINDSAIQGH NQSEYLQQQL QRCQSFNGQK SPPPQQQESH HQHQQQQSQC 480 MQTPQHQQMQ EQKHSPDFQC VPNGLSVFSQ LSSTNQSPPS TLQTVSAFSQ QQNLQDRNIS 540 SLSPSNVPSM HDTLRPFPSE AGSNLQGVPR TTPVPVSDPW SSKRVAMESV IPSSSHVNSP 600 HIQHLDSAPS NIPQSSSLAP LPGRECLVDQ DGNSDNQNHL LFGVNIDSQS LLMQGGIPSL 660 QEDNGCIASL QDDNDSSTIP YSTCNFLSPS QNDFPLNEAL ASSGCLDESG YASFSENSDH 720 VNQPTAAFVK VYKSGAFGRL LDITKFSSYH ELRSEVGRLF GLDGQLEDPA RSGWQLVFVD 780 REDDILLVGD DPWQEFVNSV SCIKVLTPQE VQQMGKQGID LLSSAPARRL GNSCDNYAGR 840 QESRSLSTVI ASVGSVEF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30330.2 | 0.0 | ARF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG018730.14 |