PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG018600.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 153aa MW: 16746.2 Da PI: 10.2067 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.1 | 4.1e-18 | 30 | 77 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed+llv+ v+++G g+W+++ r+ g+ R++k+c++rw ++l TRIDC6AG018600.1 30 KGPWTPDEDQLLVEHVRRHGEGSWNAVRRETGLLRCGKSCRLRWANHL 77 79******************************99**********9996 PP | |||||||
2 | Myb_DNA-binding | 28.6 | 3.4e-09 | 83 | 118 | 1 | 36 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS- CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRt 36 rg++++eE+ l+++++++ G++ W++I++++ +gR+ TRIDC6AG018600.1 83 RGPFSPEEERLILRLHALIGNK-WARISAHVStTGRS 118 89********************.********988887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence |
MAVEAPQQPE QAAGGSVEQG AAAGGGRLKK GPWTPDEDQL LVEHVRRHGE GSWNAVRRET 60 GLLRCGKSCR LRWANHLRPN LKRGPFSPEE ERLILRLHAL IGNKWARISA HVSTTGRSIP 120 LPRLAIRISC LPLPIDCLVP DLRLHAAAGE DGQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G32460.1 | 3e-42 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG018600.1 |