PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG017730.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Whirly | ||||||||
Protein Properties | Length: 201aa MW: 22120.4 Da PI: 9.849 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 183.9 | 2.8e-57 | 54 | 191 | 2 | 139 |
Whirly 2 vyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkal 94 v+k+kaal++ +++p f++++sg +++r+G+++l++ +a+++rkyd+ kkq fals+tev++l++l++ esceffhdp++k+s+eG+v+k+l TRIDC6AG017730.5 54 VFKGKAALSISPILPLFTKVESGGSRVDRNGSVMLTFFPAVGQRKYDYTKKQLFALSPTEVGSLISLGPAESCEFFHDPSMKSSHEGQVKKSL 146 9******************************************************************************************** PP Whirly 95 kvePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139 ++ Pl G+fvn++v n+++k+ne++svPv+kaefav+r++l+ TRIDC6AG017730.5 147 SITPLGSDNGYFVNITVLNNVQKTNERLSVPVTKAEFAVMRTALS 191 ******999*********************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
QWVYNKFFFV LCRGVTDLKD VLWSGSLTFK HALSTSAANV DENASVKKYA SYTVFKGKAA 60 LSISPILPLF TKVESGGSRV DRNGSVMLTF FPAVGQRKYD YTKKQLFALS PTEVGSLISL 120 GPAESCEFFH DPSMKSSHEG QVKKSLSITP LGSDNGYFVN ITVLNNVQKT NERLSVPVTK 180 AEFAVMRTAL SVSFHVAILI Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71260.1 | 3e-66 | Whirly family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG017730.5 |