PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG014380.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SBP
Protein Properties Length: 286aa    MW: 31050.7 Da    PI: 10.225
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG014380.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP134.43.6e-42191267278
                       -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
               SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                       CqvegC+adls++k+yhr+h+vCe h+kap+v+v+gle+rfCqqCsrfh+l efD++krsCrrrL++hn+rrrk+q+
  TRIDC6AG014380.7 191 CQVEGCKADLSTVKDYHRKHRVCELHAKAPKVVVAGLERRFCQQCSRFHALAEFDQKKRSCRRRLNDHNSRRRKPQP 267
                       **************************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MGSFGMEWNQ RSSVLWDWEN FPPIGENPKN AMQADPRFAA VAATMGNEPL HSSGGSGSGS  60
GSGNFSSSSE MGYGSSKSSM SASIDSSSKA GNNMEFRFAP VKNTDRNMSK NTELGKVDNT  120
RTGTSPSPVV AVSSGEPVIG LKLGKRTYFE DVCGGQSVKS SPSGAASAPN KSPAVGKKAK  180
AEQQKPHNSY CQVEGCKADL STVKDYHRKH RVCELHAKAP KVVVAGLERR FCQQCSRFHA  240
LAEFDQKKRS CRRRLNDHNS RRRKPQPEAI SFSSSRMSTM FYGTIY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1247264KKRSCRRRLNDHNSRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43270.17e-44SBP family protein