PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG012620.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ERF

Protein Properties

Length: 394aa MW: 43238.4 Da PI: 4.6569

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG012620.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	52.6	1.1e-16	127	176	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++G+r+++ +g+W+AeIrdps+ r++lg+f +ae Aa+a++ +++++g TRIDC6AG012620.1 127 KFRGIRQRP-WGKWAAEIRDPSK---GVRVWLGTFKSAEAAARAYDVEARRIYG 176 89*****.******965...4******************9999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
CYPASLKNLP HLPIPWRPLP PVDDYDEVPS AVMYGGASLM DLEVSTVMRK VIEATLRPKK 60 KTPRPGGSGD FEADYENFEA DSGESDLDLG HSGVDEKDDD EEVIEIKPVA AVKRRSLSQA 120 KRKRKNKFRG IRQRPWGKWA AEIRDPSKGV RVWLGTFKSA EAAARAYDVE ARRIYGNKAN 180 VNFPEEPTVP QKRRTRRPAP KAPKLRASWE PTAIPVVNNL ANPNAFVYPS ADFASNQPLA 240 LHENVSFVPT MNSDGPVEAS VMNLHSDQGS NSFGYSDLGW NYDTKTPDIS STTPISTIAD 300 GVESALVQSN PYNSVVIAEG AESAALVQSN TYNSTVPPAM ENNDIDIVAW ATLLMDDGVV 360 KPIDSLLNFD VPQDVSGNMD IWSSDDMPMC GEFV

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

CYPASLKNLP HLPIPWRPLP PVDDYDEVPS AVMYGGASLM DLEVSTVMRK VIEATLRPKK  60
KTPRPGGSGD FEADYENFEA DSGESDLDLG HSGVDEKDDD EEVIEIKPVA AVKRRSLSQA  120
KRKRKNKFRG IRQRPWGKWA AEIRDPSKGV RVWLGTFKSA EAAARAYDVE ARRIYGNKAN  180
VNFPEEPTVP QKRRTRRPAP KAPKLRASWE PTAIPVVNNL ANPNAFVYPS ADFASNQPLA  240
LHENVSFVPT MNSDGPVEAS VMNLHSDQGS NSFGYSDLGW NYDTKTPDIS STTPISTIAD  300
GVESALVQSN PYNSVVIAEG AESAALVQSN TYNSTVPPAM ENNDIDIVAW ATLLMDDGVV  360
KPIDSLLNFD VPQDVSGNMD IWSSDDMPMC GEFV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	113	124	KRRSLSQAKRKR
2	191	197	QKRRTRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53910.3	5e-24	ERF family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG012620.1