PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG005350.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 174aa    MW: 19309.1 Da    PI: 9.1254
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG005350.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.41.2e-082551254
                      HHHHHHHHHHHHHCTSCC.C.............TTS-STCHHHHHHHHHHHHHH CS
               HLH 12 RRdriNsafeeLrellPk.as..........kapskKlsKaeiLekAveYIksL 54
                      RRd++N++f eL +++ +             ++++ Kl+Ka+iL  A++ + +L
  TRIDC6AG005350.4  2 RRDKLNDRFLELCSVMNSgKHsgleecsasnSGKNAKLDKASILSDATRMLTQL 55
                      ******************6559***************************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MRRDKLNDRF LELCSVMNSG KHSGLEECSA SNSGKNAKLD KASILSDATR MLTQLRGETE  60
KLKESNSNLR ETIKDLKVEK NELRDEKLSL KAEKERLEQQ LKAASAAPTG FAPHMPYPAA  120
FHPAVYPPFA PPYQVPANKG APIPAAFPGM AMWHWLPPTA MDTTQDPKLW PPNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.16e-47bHLH family protein