PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG005350.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 235aa MW: 25284.6 Da PI: 7.0331 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.3 | 2e-11 | 55 | 116 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C.............TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.as..........kapskKlsKaeiLekAveYIksL 54 ++ rE+ RRd++N++f eL +++ + ++++ Kl+Ka+iL A++ + +L TRIDC6AG005350.1 55 SKACREKMRRDKLNDRFLELCSVMNSgKHsgleecsasnSGKNAKLDKASILSDATRMLTQL 116 6789**********************6559***************************99998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
DEFLIGGAGD GGEGLAAFCD GGLGIEDVSG GDSGLGHSNL GKRARDEPSS SGPKSKACRE 60 KMRRDKLNDR FLELCSVMNS GKHSGLEECS ASNSGKNAKL DKASILSDAT RMLTQLRGET 120 EKLKESNSNL RETIKDLKVE KNELRDEKLS LKAEKERLEQ QLKAASAAPT GFAPHMPYPA 180 AFHPAVYPPF APPYQVPANK GAPIPAAFPG MAMWHWLPPT AMDTTQDPKL WPPNA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 4e-54 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG005350.1 |